Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0792 ATGTTTAGCAGGCCAAGAGGTGCTAGTGCTTTTGGTGTATTTAAATGGAAATTTCAAGGTAAATCATCTTTGACATCAGATTTGCTTCCGGATGTTCCTCCAGAGATTGAATTGTCAGACTATAGACCGATCCCAAGTTCAGGTAGTGAAAGCCCTTCAGGGCTCCTCAATGATGAGAGCTCAAATGTGGAGCCTATTGCTGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTACTACTGCGAGAAAGGGCTTTGGTGCATTGTTGTAAAGTGGATTGTTGAACTTCTGAGTCTAGGTTTTACCATATGTTTTTCTGGATTTTTTTTACTATATGTCGATTGGAATGGGCTTAGCAATGCCAAGTGTGGGATGGATGCAGTTGAATCTGGAATTAAGCCCTGTGATCTAGCAAAAGAAGCTCTTCATCAGCATCCTTTAACCCCACTGACACTTACCAAAGTTATCATTGTTGGATACCTGGGAATATTTTCCATATATTGGATATTTTGTTTCTTGAGGTTTTTCTCTCAACTAAAGGACACTCTGGAAATCCGTCAATTTTACTACAATAGTCTTCATGTTACCGACAATGAAATTCAAACCATGCCTTGGGCAACAATTCTTGATAAGGTTGTTTTGGTACAAAATTCACAACAGCTCTGTTTTGTAAAGGATCTTTCTGCTCATGACATGGTGATGAGACTGATGCGGAAGGAGAACTACTTAATTGGCATGCTCAACAAGGGGGTGCTTGCTTTCCCCGTTTCTCAGTGGGTCCCTGGTGCTGGTCCTGCAGTGAAATCTGGTCCTAATGGCATGCAATGTCGTCTAATGCTCACCAAGACCCTTGAGTGGACTTTGAGTTGGGTCATCCTACATTGCATGTTTGATCGAAACTTTTGTGTTAGAAGGGACTTTGTGTCTAATCCAAAGACATTAAGGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAACAATTTTATAATAATCCAAGCACAGCTTCATCTCAAAGATGGTCAAATTTATCAAGGTGGATCTTTAGGGAATTCAACGAGGTGGACCATCTCTTCAAGCATCGGGTTAATAACAGTGTTGTACATGCTTCTGAGTATCTCAGCCAATTTCGTTCACCTATGATATCTAACATTGCAAAGTTCATCTCTTTTGTATCGGGTGGCTTTGTTGCAATTCTGCTCATCATTGCTTTTCTTGATGAATCTCTGCTAGAGGGCCATATATTTGGTCGAAATTTGTTTTGGTATGCTGCTGTTTTTGGGGCAATAACTGCAATTAGCAGGGTTGCTGTTACAAACCAGCTTCTGGTCTTAGATTCTGAGGGGGCAATGTCAATGGTGGTTCAACACACTCATTATATGCCAAAGAGATGGCGAGGCAAAGAAAGTACTGAAATGGTTCGCACTGAGTTTGAAACCTTGTTTCAGTATACTGGGACAATGTTACTTGAGGAGATGGCCTCAATTTTTGTCACTCCATATTTACTTTTGTTTGTTGTCCCAAAGCGGGTTAATGATATTTTGCAGTTCATTTCAGATTTCACAGTGAATGTTGAAGGTGTTGGCGATGTTTGTAGTTTCAGTGTCTTTGACTTTCAACGGCATGGAAACAGCAATTATGGTTCCCCACACAATGCACCTCGCAGTCAAAGGAGTTCTCAGGGGAAGATGGAGAAATCATTTTTAAGCTTTCACAGTAGTTATCCATCATGGGAACCAAATTCTCAGGGGAAGCACTTTTTGCAAAATCTTAGAAGCTTCAAAGAGCAAAATTTGCAAGGACATGGAAACCAACATGCATTTCCATCTCCCAGATTGTGGAAGGGTAGTCCTAGTGATTGGAGCAACGTAGACAGAAACAGGTTTATATCCAGGGAAATGCCATATGTAACTGGCACTCACTTGACTTCATTGTGGCTGATTGATGCTGATCAAAACAATCATCCTTACCCTCTAGATTGGTACTATACTTGTCTACCTCGTAATGCAACTATGAAAGAAGTTCCACCATTTGAAGAAACTGAGTTTCATTCGGGAGAGTACATAATGCCCTCCAACTTGAGTCGGAGTGAACCTGGCTATGAAGAATACTTGAATGAAAATCAGGCTGCATCTCATCTCAGGGCTTACTCATTGGGTACCATCTTCAGGGAAAGCCTAATTCAGGATCATATTTTTACTGATCGACGCGACTCTATCAGAAATCACTGGTGGGCAAGAAGTGAGCCGCAGGTTGGAGAAGATCAGACAAGCTTTTTTGAACCTCCAGATCTTAATCACCAAACATCACGTGATTATTCTAATAAGTTCTCTGATAGAGGTTGGGGGGATCAAGAACAACACTTGGGCTGGAGTGATTATCACAGATTATCTAGAACAAGTGGCCCAGATGATTTGGAGGAAGGAGAGCTAAAACTTCATTTTGATGATATCTATAGCAGACCTCCGAAAACTGCCACTGTAAATCCAAGCCCTGCAAGGTTTTGA 2565 0.4113 MFSRPRGASAFGVFKWKFQGKSSLTSDLLPDVPPEIELSDYRPIPSSGSESPSGLLNDESSNVEPIADLDLFFERLYSYYCEKGLWCIVVKWIVELLSLGFTICFSGFFLLYVDWNGLSNAKCGMDAVESGIKPCDLAKEALHQHPLTPLTLTKVIIVGYLGIFSIYWIFCFLRFFSQLKDTLEIRQFYYNSLHVTDNEIQTMPWATILDKVVLVQNSQQLCFVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPVSQWVPGAGPAVKSGPNGMQCRLMLTKTLEWTLSWVILHCMFDRNFCVRRDFVSNPKTLRKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNNPSTASSQRWSNLSRWIFREFNEVDHLFKHRVNNSVVHASEYLSQFRSPMISNIAKFISFVSGGFVAILLIIAFLDESLLEGHIFGRNLFWYAAVFGAITAISRVAVTNQLLVLDSEGAMSMVVQHTHYMPKRWRGKESTEMVRTEFETLFQYTGTMLLEEMASIFVTPYLLLFVVPKRVNDILQFISDFTVNVEGVGDVCSFSVFDFQRHGNSNYGSPHNAPRSQRSSQGKMEKSFLSFHSSYPSWEPNSQGKHFLQNLRSFKEQNLQGHGNQHAFPSPRLWKGSPSDWSNVDRNRFISREMPYVTGTHLTSLWLIDADQNNHPYPLDWYYTCLPRNATMKEVPPFEETEFHSGEYIMPSNLSRSEPGYEEYLNENQAASHLRAYSLGTIFRESLIQDHIFTDRRDSIRNHWWARSEPQVGEDQTSFFEPPDLNHQTSRDYSNKFSDRGWGDQEQHLGWSDYHRLSRTSGPDDLEEGELKLHFDDIYSRPPKTATVNPSPARF 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0792 854 MobiDBLite consensus disorder prediction 773 791 - -
Dere02g0792 854 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Dere02g0792 854 MobiDBLite consensus disorder prediction 773 800 - -
Dere02g0792 854 MobiDBLite consensus disorder prediction 44 58 - -
Dere02g0792 854 PANTHER APG9 AUTOPHAGY 9 2 796 IPR007241 GO:0006914
Dere02g0792 854 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0792 Dere-ChrDere02 7481582 7486111 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3141 01 46047338 46053341 Dere02g0792 02 7481582 7486111 CCT
Dere02g0792 02 7481582 7486111 Dere02g0792 02 7481582 7486111 ECH