Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3141 ATGTTTAGCTGGCCGAGGGCTCCTAGTGTTTTTAACATATTCAAGCGGAAGCATCAAGGTGAATCATCTCTGACAACGGGTTTGCTTCAGGATGTTCCACCAGAGATTGAATTGTCTGACTATGGAAGGATCCCAAGTTCAGGTAGTGAGAGCCCTTCTGGGCTTCTTAATGGTGAGAGCTTGAATGTAGAGCCAATTTCTGACTTGGACCTCTTCTTTGAAAGGCTTTACAGCTACTACTGTGGGAAAGGGCTCTGGTGCATCATTATAAAGTGGATTGTTGAACTTCTTAGTCTTGGATTTACCATATGTTTCTCAGGATTTTTCTTATTATATGTTGATTGGAATGGACTTCGTAATGCAAAGTGTGGGATGGATGCAGTTGAATCGGGAATTAAGCCCTGTGATCTTGTTAAAGAAGCTCTTCACCAACACCCTTTGACCCCACTAACACTTACAAAAGCTATTATTGTTGGATACTTGGCAATATTTTCCATCTATTGGATATTTTGTTTCTTGAGGTTCTTTGCTCAACTAAAGGACACTCTGGAAATCCGTCAATTTTACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACTATGCCCTGGGCAACAATTCTTGAAAAAGTTATTCTGGTGCAAAATTCTCGACAGCTTTGTGTGGTGAAGGATCTCTCTGCTCATGACATAGTGATGAGATTGATGCGGAAAGAAAACTACTTGATTGGAATGCTCAACAAGGGAGTGCTTGCTTTCCCCATTTCTCAGTGGGTCCCAGGCGCTGGTCCTACAGTGAAATGTGGTCCTAATGGAACACAAAATCGTCTAATCCTAACCAAGACCCTTGAGTGGACATTAAACTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTTAGAAGGGATTTTGTGTCCAATCCACAGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGTCATCTTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAACAATTTTATAATCATCCGAGCACTGCATCATCTCGAGGATGGTCAAATTTGTCAAGATGGATCTTCAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCATCGTCTTAGTAGCAGTGCAGTACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATTATATCTATCATTGCAAAGTTCATATCTTTTGTATCGGGTGGATTTGCTGCAATTCTTATCATCATTGCTTTTCTTGAGGAATCCCTGCTTGAGGGCCATATATTTGGTCGAAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACAGCCATTAGCCGGGCTGCAGTGACAAATGAGCTTCTGGTCTTAGATCCAGTAGGAGCAATGTCTATGGTGGTTCAGCATACGCATTATATGCCAAAGAGATGGCGTGGCAACGAAAATACTGAAATGGTCCGCATTGAATTTGAAACCCTATTTCAGTATACTGGGATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATATTTACTTTTGTTTGTTGTCTCAAAGCGGGTTGATGACATTTTGCAGTTCATTGCAGATTTCACAGTGAATGTTGAAGGCGTTGGCCATGTTTGCAGTTTTAGTGTGTTTGATTTTCAAGCCCATGGAAACTACAATTATGGTTCCCCATGCAATGCACCTCGCAACAGGAGGAGTTCCCAGGGGAAGATGGAGAAATCATTTCTGAGCTTTCAAAGTACTTACCTGTCATGGGAACCAAATACTCAGGGGAAGCAATTTTTGCTGAATCTCAGAGCCTTGAGAGAGCAAAATTTACCAGGACATGGAAACAGACATGCATTTTCCCCTCCCAGAATGTGGGCAGGTAGTCCCGATATGAGGAGCAATGGAGACAGGAACCCGTATATATTCAGGGAAATGCCACATAATACTTTTAGAATACGCAATCACTTAGGTCCTTTGTGGCCAAGTGATGTCAATCAAAACAATAATCTTTATCTTCTTGATTGGTACTATACTTCTCGACCTCATCATGTGACTTTGAGAGATGTTCCAACAGAACCATTTGAGAAGACCGGGCATCATTCCAGAGAGTATTGGATGCCCTCCGATATAACAGCGAATGAACCAGGGTATGAAGAATACTTAAGAGAGTATCGCAATGATCGAGCTGCATCTCATTTGGGGGCATCCACATCAACTCCCATCTTCAGGGAAACAATACTTGAGGATCAAAGTTATAATGATCTGCCAGAGTCTAGCAGGAGTCACTGGTGGGCTAGAAGTCGGCCACATGGTGGACAAGCTCAGGCTAGCTTCTTTGAGCCCCCGGATTTTAATCACCAAACATACAATTATTATGATAAGTTATCTGATAGGGGATCGGATGATCACGAGCAACATCTGGACTGGAGAGATTATCAGAGATTATACAGAACAACACACACAGATGACTTAGAGGCAGTGGAATTTAATCTTCATTTTGATGATATTTATAGCAGACCCCCAGAAACTCCCACTGTAAATCCAAGCGCTGCAAGCCATTGA 2586 0.4184 MFSWPRAPSVFNIFKRKHQGESSLTTGLLQDVPPEIELSDYGRIPSSGSESPSGLLNGESLNVEPISDLDLFFERLYSYYCGKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLVKEALHQHPLTPLTLTKAIIVGYLAIFSIYWIFCFLRFFAQLKDTLEIRQFYYNSLHVTDNEIQTMPWATILEKVILVQNSRQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVKCGPNGTQNRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPQTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRGWSNLSRWIFREFNEVDHLFKHRLSSSAVHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAVTNELLVLDPVGAMSMVVQHTHYMPKRWRGNENTEMVRIEFETLFQYTGMMLLEEMASIFLTPYLLLFVVSKRVDDILQFIADFTVNVEGVGHVCSFSVFDFQAHGNYNYGSPCNAPRNRRSSQGKMEKSFLSFQSTYLSWEPNTQGKQFLLNLRALREQNLPGHGNRHAFSPPRMWAGSPDMRSNGDRNPYIFREMPHNTFRIRNHLGPLWPSDVNQNNNLYLLDWYYTSRPHHVTLRDVPTEPFEKTGHHSREYWMPSDITANEPGYEEYLREYRNDRAASHLGASTSTPIFRETILEDQSYNDLPESSRSHWWARSRPHGGQAQASFFEPPDFNHQTYNYYDKLSDRGSDDHEQHLDWRDYQRLYRTTHTDDLEAVEFNLHFDDIYSRPPETPTVNPSAASH 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3141 861 PANTHER APG9 AUTOPHAGY 9 2 804 IPR007241 GO:0006914
Dere01g3141 861 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3141 Dere-ChrDere01 46047338 46053341 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3141 01 46047338 46053341 Dere02g0792 02 7481582 7486111 CCT
Dere01g3141 01 46047338 46053341 Dere01g3141 01 46047338 46053341 ECH