Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0685 ATGGAACTCAGTAAGGTGACGCTGGAGATCTTCTCCAAGCTCGAGCAGAAATGGCTTTCTCACTGTGATACCACTAGCAAAACCCGCATTCTCAGCATTGACGGAGGAGGAACCACTGCTGTTGTTGCCGGCGCCGCCCTCGTTCGCCTCGAGGACCAGATCCGTCTCCAGACCCGCGATCCCCACGCCCAGATTGTCGATTATTTTGACATCATTGCCGGAACCGGGATTGGTGCTCTCCTTGCAGCCATGATCGCCGCAGATGACGGCTCCGGCAGGCCTCTCTATACTGCTAGAGATGCCGTGCGTGTCATCACGCGCAGGAATTCCGAACTCTATAAGCCCAAACTCCCCGGAGTTTTCCGCCGGCGCCGGAGGTTCTCTTCCAGGAGCATGGACAAGGTGCTAAAGGAAGTTTTCCGGAGACGAGAGGATGGACGACAGTTGACCTTGAAGGACACGTGTAGGCCACTGCTTATACCTTGCTTTGACCTCAAGAGTGCGGCGCCGTTCGTGTTTTCACGAGCGGACGCGTCCGAGTCGCTCAGTTTCAACTTCGAGCTCTGGAAAGTATGTCGCGCCACCTCGGCCACGCCCAGACTCTTCAAGCCTTTTCACTTAACCTCAGTGGACGGCAAGACCTCCTGTTGCGCCGTCGACGGAGGACTGGTGATGAACAATCCAACGGCGGCGGCTGTGACTCACGTGCTACACAACAAGCGTGATTTCCCGTCGTTGAATGGTGTGGGGGATCTCCTAGTCCTCTCCTTGGGGAACGGTACGTCCAGCGGGGCTTCCGGAAGGAAGGTTCGCGAGAATGGGAAGACATTGTGCTCGATGTCGTCGATGGTTGACATTGTAGTGGATGGTGTTTCCGAAACCATTGACCAAATGTTGGGGAACGCCTTCTGTTGGAACCGTACGGACTACGTCAGACTCCAGGCGTTGGGTTTGGGATGTGGGGAGGAGGTGCTGAAAGAGAAGGGTGTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTAAATGAGACCAACGGACATAGAATCGATAGCTTTGTGCAGCGTCTTGTTGCTTCCGGAAAAGACCAATCTACCGCCTACTCCTTGCAAGCCATCCGCCGTTAA 1125 0.5538 MELSKVTLEIFSKLEQKWLSHCDTTSKTRILSIDGGGTTAVVAGAALVRLEDQIRLQTRDPHAQIVDYFDIIAGTGIGALLAAMIAADDGSGRPLYTARDAVRVITRRNSELYKPKLPGVFRRRRRFSSRSMDKVLKEVFRRREDGRQLTLKDTCRPLLIPCFDLKSAAPFVFSRADASESLSFNFELWKVCRATSATPRLFKPFHLTSVDGKTSCCAVDGGLVMNNPTAAAVTHVLHNKRDFPSLNGVGDLLVLSLGNGTSSGASGRKVRENGKTLCSMSSMVDIVVDGVSETIDQMLGNAFCWNRTDYVRLQALGLGCGEEVLKEKGVESLPFGGKRLLNETNGHRIDSFVQRLVASGKDQSTAYSLQAIRR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0685 374 Gene3D Cytosolic phospholipase A2 catalytic domain 18 367 - -
Dere02g0685 374 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Dere02g0685 374 CDD Pat17_PNPLA8_PNPLA9_like 30 315 - -
Dere02g0685 374 Coils Coil 369 374 - -
Dere02g0685 374 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Dere02g0685 374 PANTHER PATATIN-LIKE PROTEIN 6 1 363 - -
Dere02g0685 374 SUPERFAMILY FabD/lysophospholipase-like 27 316 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0685 Dere-ChrDere02 6400675 6401916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0685 1 361 Acyl Lipid Metabolism Gene Families AT3G63200 72.603 0.0 550
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3262 01 47423889 47425248 Dere02g0685 02 6400675 6401916 CCT
Dere02g0685 02 6400675 6401916 Dere02g0685 02 6400675 6401916 ECH