Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3262 ATGGAGCTTAGCAAGGTGACGCTGGAGATCTTCTCCAAATTAGAGCAGAAATGGCTTTCTCACTGTGAAACCGCCAAGAAAACTCGCATTCTTAGCATCGACGGTGGAGGAACCACCGGCATTGTTGCTGGAGCCGCCCTGATCCACCTTGAGGAACAGATCCGTCTCCAGACCGGCGATTCCCACGCCCAAATAGCAGATTTCTTTGATATCGTTGCCGGTACCGGCATTGGCGCCATCCTTGCAGCCATGATCACCGCCGAAGATGGCTCCGGCAGGCCTCTTTATACTGCTAGAGATGCCGTTCATGTCATCACTGAGAGGAATTCGGAACTCTACAAGCTTAAACCAGCCGGAGTTTTTCGCCGGCGCCGGAGATTCTCTTCGAGGAGCATGGATAACGTGTTAAAGCAAGTGTTCCAGAGAAGAGAGGATGGAAAGTTGTTGACTCTGAAGGACACATATAAACCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCTGCGCCATTCGTGTTTTCCCGAGCCGACGCGTCCGAATCGCCGAGTTTCAACTTTGAGCTCTGGAAGGCATGCCGCGCTACCTCAGCCACACCGAGCCTCTTCAAGCCCTTCCACTTTACTTCCGTGGATGGCAAGACCTGCTGCTCCGCCGTGGACGGCGGTCTGGTGATGAACAATCCGACAGCGGCGGCTGTGACGCACGTGCTACACAACAAGCGTGAATTCCCGACAGTTAACGGCGTGGAGGATCTCCTGGTACTTTCAATAGGCAACGGTGCATCAAGCGAGAGCCACGGACGGAAGATATGCGATAATGAGGAATGCTCGACGTCGTGGGTGGTTGACATTGTGGTGGATGGCGTCTCCGAGACGGTTGACCAAATGTTGGGGAACGCCTTCAGTTGGAATCGTACGGACTACGTTAGAATCCAGGCGTTGGGTTTGGGAAGGACGAGAGACGAGGTGCTGAAAGAGAGAGGACTGGAGTCGTTAGCATTTGGGGGAAAGAGGTTGCTGAAGGAGAGTAACGGAGAGAGAATCGAGAGCTTCGTGCAGCGTCTTGTTGCATCTGGAAAAGCCAGCCTACCTCCCAGTCCCTGCAAGCATGCCTCCCGTTACCCCTCTTGCTAA 1134 0.537 MELSKVTLEIFSKLEQKWLSHCETAKKTRILSIDGGGTTGIVAGAALIHLEEQIRLQTGDSHAQIADFFDIVAGTGIGAILAAMITAEDGSGRPLYTARDAVHVITERNSELYKLKPAGVFRRRRRFSSRSMDNVLKQVFQRREDGKLLTLKDTYKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKACRATSATPSLFKPFHFTSVDGKTCCSAVDGGLVMNNPTAAAVTHVLHNKREFPTVNGVEDLLVLSIGNGASSESHGRKICDNEECSTSWVVDIVVDGVSETVDQMLGNAFSWNRTDYVRIQALGLGRTRDEVLKERGLESLAFGGKRLLKESNGERIESFVQRLVASGKASLPPSPCKHASRYPSC 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3262 377 SUPERFAMILY FabD/lysophospholipase-like 26 314 IPR016035 -
Dere01g3262 377 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Dere01g3262 377 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Dere01g3262 377 Gene3D Cytosolic phospholipase A2 catalytic domain 17 363 - -
Dere01g3262 377 CDD Pat17_PNPLA8_PNPLA9_like 30 322 - -
Dere01g3262 377 PANTHER PATATIN-LIKE PROTEIN 6 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3262 Dere-ChrDere01 47423889 47425248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3262 1 375 Acyl Lipid Metabolism Gene Families AT3G63200 74.339 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3262 01 47423889 47425248 Dere02g0685 02 6400675 6401916 CCT
Dere01g3262 01 47423889 47425248 Dere01g3262 01 47423889 47425248 ECH