Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0642 ATGGCATCACAAAGGGATAAGACACCCAAGCTCTTTTCTCCCAATTCCGTTTTTATTTTGACTTTGGAATCCCGGTCCTTAGAAGCAGCCAAGCCGAGCCCAGCCGACGCGGCTCTCACAGCGGCACGACGTCGTTGGAGTGGATCAACCCGGAATGGGACCCACAGTCAGATGGATGCATTGGTGGGTGAGTCCGAATCGCCAGGGTCGGGCGGAGTGAGAATGGGACCCACCACGTCACCGGCTTTGGCCTGGGCTTCACTGATGCTATATGCACTCATTATGAATTTAAATGAAGTATTATGCGTATGTACAATTACAAAAACCTCCCTGCCTGCAAAAGAAAAGCAAGTTGCAATGAATGGGATTGCGTGCGCAGGAATTGGTGCCGGAATAGTCGTGATGCCGATGGCGGCTGGGCCAGCATCGCCGACCGATCCTGCTCCTCCGGTGGGGCCTACTACGGTGCCGATGCAATCAACGCCTATGATGGTGTCCGAGTCCTTCGCCAAGGACGCCATCATTTCTTGGTTCCGCGGCGAGTTTGCAGCTGCCAACGCCATTATCGACGCTCTCTGTGGTCACCTTGCACAGCTCAGCACCGCCGCAGGGACCTCCGACTACGACTTTGCCTTCGCCGCAATTCATCGCCGGAGACTCAACTGGATCCCGGTCATACAGATGCAGAAGTATCACTCAATAGCCGAAGTCGCCGTAGAGCTTCGCAAAGTCTCGGAGAAGAAAACAGGGGCCAAGGAAAGGAGGCAAGATGAGAGAAAGCGTGAGGGCGTGAACACTTGTCTGGATGACGAAAAGAAAATCAATGAGAAAATGATAGATAGTACTGGAAATGGCGGCGACGAGGCTGCCGAAGAGTATGATTCGCCTGAAAGTGAAATTACCGATTCAGGATCTCAAGAAATGCAAGCCAGTTGGATGAACAGTAGTATATGTTCCAACCACGACGAATGTGAAGGACGTTGTTCCCAGATAAAGTTGACAAAAGGTTTCTCAGCAAAGGAGTCGGTGAAGGGGCATATGGTGAATGTAGTGAAAGGATTAAAGTTATATGAGGACGTTTTCACTGATTCAGAACTCTTCAAGCTCTTTGATTTCGTCAATGAGATCCATTCTGCTGGCCAAAATGGAGAACTCTCGGGCGAAACCTTTATACTATTCAACAAACAGATGAAAGGAAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATTTTTGGACAGATCAAGGAGGACGCAAAAAGCAATATAGAGCCAATTCCAGCTCTTCTCCAAGGTGTCATTGATCATCTTATCCAATGGAAACTACTTCCAGAGTACAAAAGGCCTAATAGTTGTATCATCAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCTGAAACCACCCCACCTGGATCAACCCGTGTCTACTCTGCTTCTCTCTGAATCAACTATGGCTTTTGGGCGCACCCTTTCGAGCGACAATGAAGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAAAATGGGTCTTTTATAGTGATGAGAGGAAACTGTGCTGACATGGCAAGGCATGTGATGTGTCCATCCCCTAACAGAAGGGTCAGCATCACCTTCTTCAAGGTAAGGCCAGATTCCAACCAATGCCAATCACCAAGTCATTCCGTGGCAACTGCAGTGACACTTTGGCAACCTGGTATGGCTACTCCATATGCTTCGCCAAATGGAGCTCTCAATGGCAATGAGTCCTTGGATATGATGCCCAAATGGGGAATAATTCGTGCCCCAATGGTCATGCTAACCCCTATGCGCCCTATGGTGTTGAATCCTCGCAAGCCTCCTCGTGGTGGGACAGGGGTGTTCTTACCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCACCTCGTGCTCAAAAGGGACGGCTTCTGGCGTTACCTCCCCCAGTTGAGTCACACTCTCAAATGGCAGAGTCCACTTCCGACCCCACTATTAGTGTTGAAGGGCAAGCTTGA 2022 0.4951 MASQRDKTPKLFSPNSVFILTLESRSLEAAKPSPADAALTAARRRWSGSTRNGTHSQMDALVGESESPGSGGVRMGPTTSPALAWASLMLYALIMNLNEVLCVCTITKTSLPAKEKQVAMNGIACAGIGAGIVVMPMAAGPASPTDPAPPVGPTTVPMQSTPMMVSESFAKDAIISWFRGEFAAANAIIDALCGHLAQLSTAAGTSDYDFAFAAIHRRRLNWIPVIQMQKYHSIAEVAVELRKVSEKKTGAKERRQDERKREGVNTCLDDEKKINEKMIDSTGNGGDEAAEEYDSPESEITDSGSQEMQASWMNSSICSNHDECEGRCSQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELFKLFDFVNEIHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPALLQGVIDHLIQWKLLPEYKRPNSCIINFFEEGEYSQPFLKPPHLDQPVSTLLLSESTMAFGRTLSSDNEGNYKGPLMLSLKNGSFIVMRGNCADMARHVMCPSPNRRVSITFFKVRPDSNQCQSPSHSVATAVTLWQPGMATPYASPNGALNGNESLDMMPKWGIIRAPMVMLTPMRPMVLNPRKPPRGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLALPPPVESHSQMAESTSDPTISVEGQA 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0642 673 Gene3D - 337 552 IPR037151 -
Dere02g0642 673 MobiDBLite consensus disorder prediction 655 673 - -
Dere02g0642 673 SUPERFAMILY Clavaminate synthase-like 344 544 - -
Dere02g0642 673 MobiDBLite consensus disorder prediction 278 302 - -
Dere02g0642 673 MobiDBLite consensus disorder prediction 647 673 - -
Dere02g0642 673 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 169 648 IPR044842 GO:0003729|GO:0006402|GO:0032451
Dere02g0642 673 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0642 Dere-ChrDere02 6016789 6024131 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3318 01 47919254 47923687 Dere02g0642 02 6016789 6024131 CCT
Dere02g0642 02 6016789 6024131 Dere02g0642 02 6016789 6024131 ECH