Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0627 ATGACGGATCAAAGGGCCTCTAGGTGCGGCATTGGTTCGTACGTTCTGATTTTCATGTGTTTAATACAGATACAAGGTCATTTACAAGTACGTGCCATTTTGGACCCTGTTGATTTCTTGGCTCTGCAATCCATTCGCAAGGCTCTGCACGATATGCCAGGATCCAATTTCTTTTCCTCTTGGGATTTCACTTCCGACCCGTGTAATTTCGCCGGCGTTTACTGTGACTCAGATAAGGTCATTGCACTCAATCTCGGGGATCCCAGAGCCGGTGCTCCCGGTCTAACCGGCAGACTCGACCAGGCCATCGGCAAGCTCTCTGCTCTCGCCGAGCTCACGGTAGTTCCAGGAAGGATATACGGTTCTCTGCCCCAGTCATTGTCAAACTTGAAGAACCTCAGATTCCTCGGGGTCAGCCGGAACTTCATTTCAGGCCAGATTCCGGCGACCTTGGGTCAGTTGCGCAATCTCAGAACCCTCGACCTCAGCTATAACCAGTTAACTGGAAGCATTCCTCCGTCGATCGGAGCCTTACCGGGGCTAAACAATGTGATCCTCTGCCACAACCGCCTCTCCGGTTCGGTGCCTTGGTTTGCATCAAGGACCCTAACCCGCCTGGACCTGAAGCACAATGGTCTGTCCGGTTCGCTGTCTCCTGATTCTTTGCCTTCCTCCCTCCACTACCTATCACTATCATGGAACCAGCTGAGTGGGCCAGTGGATCGGCTCTTGAACCGAATGGACCAATTGAACTATCTGGATCTTAGCCTGAACCGGTTCTCGGGCACCGTTCCGGGTCGGATCTTCTCGTTTCCACTAAGCAATCTGCAATTAGAAAGGAATCAATTCTCGGGTGTAGTCCAACCAGTTGATCAGGTGAAAATCCCAACCGTTGATCTGAGCTACAACAGGCTGTCGGGTCAAGTATCGCCCATGTTCTCGACCGTACAGAATCTGTACCTCAACAACAACCGGTTCACGGGTCAGGTTCCCAGTAGCTTCGTGGATCGATTATTGGATGCTACCATACAGATCCTCTACTTACAGCACAATTATCTGACAGGGATAGCCATCAGTCCAACGGCTGAGATTCCTCTAAGCAGCTCCTTGTGTCTACAGTATAACTGCATGGTCCCACCCATTGAAACTACTTGCCCTTCGAAAGCTGGCAAGCAGAAAACCAGACCTTCTGCGCAATGCAAGTAG 1206 0.5108 MTDQRASRCGIGSYVLIFMCLIQIQGHLQVRAILDPVDFLALQSIRKALHDMPGSNFFSSWDFTSDPCNFAGVYCDSDKVIALNLGDPRAGAPGLTGRLDQAIGKLSALAELTVVPGRIYGSLPQSLSNLKNLRFLGVSRNFISGQIPATLGQLRNLRTLDLSYNQLTGSIPPSIGALPGLNNVILCHNRLSGSVPWFASRTLTRLDLKHNGLSGSLSPDSLPSSLHYLSLSWNQLSGPVDRLLNRMDQLNYLDLSLNRFSGTVPGRIFSFPLSNLQLERNQFSGVVQPVDQVKIPTVDLSYNRLSGQVSPMFSTVQNLYLNNNRFTGQVPSSFVDRLLDATIQILYLQHNYLTGIAISPTAEIPLSSSLCLQYNCMVPPIETTCPSKAGKQKTRPSAQCK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0627 401 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 19 401 - -
Dere02g0627 401 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Dere02g0627 401 FunFam Nuclear pore complex protein NUP107 36 197 - -
Dere02g0627 401 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Dere02g0627 401 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Dere02g0627 401 Pfam Leucine Rich Repeat 156 178 IPR001611 GO:0005515
Dere02g0627 401 Gene3D Ribonuclease Inhibitor 200 391 IPR032675 -
Dere02g0627 401 SUPERFAMILY L domain-like 44 380 - -
Dere02g0627 401 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0627 Dere-ChrDere02 5913677 5914882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0627 33 355 Receptor kinase-like Gene Family AT3G51740 33.518 1.03e-36 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3327 01 47975764 47976981 Dere02g0627 02 5913677 5914882 CCT
Dere02g0627 02 5913677 5914882 Dere02g0627 02 5913677 5914882 ECH