Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0621 ATGGCAGGGCTTATGAGGGGAAGCAGAGCAGCTAAGATGAGCCAACAAGACAAACACCACACCAACTCCCTCGTCCCGTTTCTGTTGTGCGCTTTGAGAAAATCAATGGTGTCGTGTCGGGTGGATCCACCCGACGACGTAATCTCCGCCGTCCCTCACATGGAGATGGGGTGGCCCACCAACGTTCAGCACATCACTCACGTCACTTTCGATCGCTTCAACGGCTTTCTGGGTCTGCCTGCCGAGTTCCAGCTTGAGATTCCGGGTCGGGTTCCAAGCGCTAGTGTAAGCGTGTTTGGCGTTTCAGCTGAATCAATGCAGTGTTCTTATGATTCAAAAGGGAACAGTATTCCGACTATTTTATTGCTAATGCAGGAGCGTTTATACTCACAGGGAGGCCTAAAGGCTGAGGGAATATTTCGCATAAACCCAGAAAATAGTGAAGAGGAGAATGTAAGGGACCAGTTGAATAGGGGGATTGTGCCAGAGGACATAGATGTGCATTGTTTGGCAGGCCTAATCAAAGCCTGGTTCCGAGAGCTTCCTTCAGGAGTTCTAGATGGGCTTTCCCCAGGGCAAGTTCTTCAGTGCAACACAGAACAAGAATACGTTGAGCTTGTAAAGCAATTGAAGCCCACTGAAGCTGCCTTGCTCAACTGGGCCGTTGATCTCATGGCTGATGTTGTTGAACATGAAGAACACAACAAAATGAATGCCAGAAATATTGCCATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCACTAACTGCTCTGATGCATGCGGTCCAAGTGATGAACTTACTCAATACCCTTATAACGAAGACACTCACAGAACGTGAAGAAACGGCAGCGGGAGCTTATTCACCAATGTCGTTTCATTCATCTGACGATGAATATGAAAGTCAGGAAGAAATGGATACTAGTGGTGGTGAAGAGGAAGAAGAAGCCGAATTTTTTTGTGAGATAGAGGAATGTGCTATGTCATTTACCGATAGCAGAACTGAGAATTCCTGCTCCAGTTTTTCCTACGAAGACAATTCTGTGCAATCAAACTTTTACAGGCACCAATGA 1077 0.467 MAGLMRGSRAAKMSQQDKHHTNSLVPFLLCALRKSMVSCRVDPPDDVISAVPHMEMGWPTNVQHITHVTFDRFNGFLGLPAEFQLEIPGRVPSASVSVFGVSAESMQCSYDSKGNSIPTILLLMQERLYSQGGLKAEGIFRINPENSEEENVRDQLNRGIVPEDIDVHCLAGLIKAWFRELPSGVLDGLSPGQVLQCNTEQEYVELVKQLKPTEAALLNWAVDLMADVVEHEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLNTLITKTLTEREETAAGAYSPMSFHSSDDEYESQEEMDTSGGEEEEEAEFFCEIEECAMSFTDSRTENSCSSFSYEDNSVQSNFYRHQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0621 358 PANTHER MKIAA1688 PROTEIN 15 345 IPR044785 GO:0005096
Dere02g0621 358 Pfam RhoGAP domain 118 252 IPR000198 GO:0007165
Dere02g0621 358 ProSiteProfiles Rho GTPase-activating proteins domain profile. 101 285 IPR000198 GO:0007165
Dere02g0621 358 CDD RhoGAP 118 275 - -
Dere02g0621 358 FunFam Rho GTPase-activating protein 5 86 279 - -
Dere02g0621 358 MobiDBLite consensus disorder prediction 285 318 - -
Dere02g0621 358 SMART RhoGAP_3 115 278 IPR000198 GO:0007165
Dere02g0621 358 SUPERFAMILY GTPase activation domain, GAP 97 275 IPR008936 -
Dere02g0621 358 Gene3D CRIB domain 53 87 IPR036936 -
Dere02g0621 358 SMART PBD_5 56 90 IPR000095 -
Dere02g0621 358 MobiDBLite consensus disorder prediction 301 318 - -
Dere02g0621 358 Gene3D Rho GTPase activation protein 89 285 IPR008936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0621 Dere-ChrDere02 5860773 5862567 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3340 01 48077235 48079492 Dere02g0621 02 5860773 5862567 CCT
Dere02g0621 02 5860773 5862567 Dere02g0621 02 5860773 5862567 ECH