Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0490 ATGGCTGCCACTACTACTCCCTCTCTAAATGCTTCAGAAAAGAAGCACTGGTGGCTTACTAACCGAAAGATTGTTGAGAAATACATTAAAGACGCTCGCAGCCTCATTGCGACCCAAGAACAGAGCGAGATCGCCTCGGCTTTGAACCTTCTAGACGCGGCATTAACCATATCTCCTCGTCTAGACCAAGCGCTTGAGCTCAAAGCCAGGTCTCTTCTCTATCTACGGCGCTTCAAGGACGTCGCTAATATGCTTCAGGACTACATTCCCAGCCTCAAAATGGCAATGGAGGACTCAGGCTCCTATTCTTCGGATAGTTCCTCTCAGCAGCTTTCAAGGGAGGGAGTGAAGCTGCTCTCATCCTCTGAGTCGTCGCCGGATCAGAGTTTCAAGTGCTTCTCTGTCTCGGACTTGAAGAAGAAAGTGATGGCAGGATTGTGTAAAAGTGGCGATAAGGAAGGCCAATGGAGATACTTGGTGTTGGGTCAAGCATGTTCCCATCTTGGTCTGATGGAGGATGCAATGGTACTTCTCCAAACCGGGAAACGCCTTGCCACCGCCGCCCTCCGCCGCGAGAGCGTGTGCTGGTCCGACGACAGCTTCTCTTTACCAAACATCCCTTTCTCCGCTGACACCAACAACCCCGCACCTACCAGTCCACCTCGTACGCCTCTCACCGAATCCGAGAGCGTCACCCAACTCCTTAGCCACATCAAGCTCCTCCTCCGCCGTCGAACGGCGGCGCTCGCGGCCCTCGAAGCGGGTCTCTATTCCGAGGCCATCCGCCACTTCTCCAAAATTGTCGACGGCCGACGTGGCGGCCCACAAGCCTTTCTCGCGGAATGCTATATGCACAGAGCCTCTGCCTACCGTTCCGCTGGTCGAATCGCAGAGTCCATTGCTGATTGTAATCGCACATTGGCTTTAGACCCCACTTGCATTCAAGCTCTTGATACCCGAGCCTCCCTTCTGGAAACCATTCGGTGCTTGCCTGATTGCTTACACGATCTTGAACACTTGAAGCTTTTGTACAATACAATCTTGCGGGATCGTAAGCTTCCAGGTCCTGCTTGGAAGCGTCATAATGTGAGGTACGGAGAGATTCCTGGGAAACTCTGTGCTCTCACGACGAAAATTCAAGAATTGAAGCAAAGGGTGGCTTCAGGGGAGACTGGTAATGTGGATTACTTCGCTTTGATTGGATTGCGACGTGGGTGTTCTCGATCGGAGTTGGAGAGGGCTCATTTATTGCTCTGTTTACGGCACAAACCTGATAAAGCTATCAACTTCATTGATCGCTGCGAGCTTGCAGACGAACGTGATCTTGAATCGGTGAAAGACAGAGCAAAAATGTCCTCTTTGTTATTGTACAGATTGCTTCAGAAGGGTTACACAAGTATGATGTCTACGATCTTGGATGAAGAAGCTGCTGAGAAGCAGAGGAAGAAGGCGGCGGCTGCTTTGCAAGCTGCACAAGCAGCAATTCAGGTTCAGGAAAAAAGCGAGTGCAGAGTGGAATATGATGTGAAGAAATCGGAGAAACCCACAGTATCTTCGTCAACTGTGAATCCGTCTGTATTCCAGGGTGTGTTTTGCCGTGATCTTGCTGTAGTTGGAAGTTTGCTTTCACAAGTGGGATTCAACCGTCCCCTTCCGGTGAAATATGAGGCATTGAGCTGTTGA 1683 0.5062 MAATTTPSLNASEKKHWWLTNRKIVEKYIKDARSLIATQEQSEIASALNLLDAALTISPRLDQALELKARSLLYLRRFKDVANMLQDYIPSLKMAMEDSGSYSSDSSSQQLSREGVKLLSSSESSPDQSFKCFSVSDLKKKVMAGLCKSGDKEGQWRYLVLGQACSHLGLMEDAMVLLQTGKRLATAALRRESVCWSDDSFSLPNIPFSADTNNPAPTSPPRTPLTESESVTQLLSHIKLLLRRRTAALAALEAGLYSEAIRHFSKIVDGRRGGPQAFLAECYMHRASAYRSAGRIAESIADCNRTLALDPTCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNTILRDRKLPGPAWKRHNVRYGEIPGKLCALTTKIQELKQRVASGETGNVDYFALIGLRRGCSRSELERAHLLLCLRHKPDKAINFIDRCELADERDLESVKDRAKMSSLLLYRLLQKGYTSMMSTILDEEAAEKQRKKAAAALQAAQAAIQVQEKSECRVEYDVKKSEKPTVSSSTVNPSVFQGVFCRDLAVVGSLLSQVGFNRPLPVKYEALSC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0490 560 SMART tpr_5 280 313 IPR019734 GO:0005515
Dere02g0490 560 Gene3D DnaJ domain 380 526 IPR036869 -
Dere02g0490 560 PANTHER OS01G0273500 PROTEIN 3 560 - -
Dere02g0490 560 CDD DnaJ 395 427 IPR001623 -
Dere02g0490 560 SUPERFAMILY TPR-like 247 341 IPR011990 GO:0005515
Dere02g0490 560 Coils Coil 474 494 - -
Dere02g0490 560 Gene3D Tetratricopeptide repeat domain 210 352 IPR011990 GO:0005515
Dere02g0490 560 SUPERFAMILY Chaperone J-domain 391 429 IPR036869 -
Dere02g0490 560 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0490 Dere-ChrDere02 4807061 4809407 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3476 01 49232376 49234803 Dere02g0490 02 4807061 4809407 CCT
Dere02g0490 02 4807061 4809407 Dere02g0490 02 4807061 4809407 ECH