Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3476 ATGGCCGTCACTGCGCCCTCCCCAAACGCTACCGAAAAGAAGCACTGGTGGCTTACCAACCGTAAGATTGTTGAGAAATACATTAAAGACGCTCGCACCCTGATGGCGACTCAAGAACAGAGCGAGATCACTGCGGCTCTGAACCTTCTAGACGCGGCTCTAGCCATCTCTCCGCGTCTAGACCAAGCCCTGGAGCTCAAAGCCAGGTCTCTGCTTTTTCTGCGGCGGTTTAAGGAGGTGGCCGATATGCTTCAAGACTACATTCCAAGCCTCAAAATGGCAAACGAAGACTCAGCCTCCTTTTCATCTGATAATTCGTCTCAGCAGCTTTCGAGAGAGGGGGTCAAGCTCCTCTCGTCCTCTTCAGAGTTGCAGGGTCGGGACCAGGGTTTCAAGTGCTTCTCCGTCTCAGACTTGAAGAAGAAAGTCATGGCAGGACTATGCAAAAGTGGCAACAAGGAAGGGCAATGGAGGTACTTGGTTTTGGGCAAAGCATGCTGCCATCTAGGTCTAATGGAGGATGCAATGGTTCTTCTCCAAACGGGTAAACGCATTGCCAGCGACGCCTTCCGTCGCGAAAGCATTTGCTGGTCCGACGACAGCTTTTCCTTATCAACCAACCCTTTCTCTTGCGACGCCACCAACCCACCACCCACCACCATACCCCGAACACCTCTTACCGAGTCCGAAAGTGTCACCCAACTTCTCAGCCACATCAAGCTTCTCCGCTGCCGTCGCACTGCGGCGCTCGCGGCCCTCGACGCCGGTCTCTACTCTGAAGCCATTCGACATTTTTCCAAAATCGTTGACGGCCGTCGCAGCGCCCCGCAAGGCTTTCTTGCCGAATGCTATATGTACAGAGCCTCCGCCTACCGTTCCGCTGGTCGAATTGCTGAGTCCATTGCTGATTGTAATCGAACCCTGGCTCTTGACCCGTCTTGCATTCAAGCTCTTGATACCAGAGCTTCCCTTCTGGAGACAATTCGATGCTTGCCGGATTGCTTACACGATCTTGAACACTTGAAACTTTTGTATAATTCGATCCTGCGGGATCGAAAGCTTCCGGGTCCTGCTTGGAAGCGTCACAATGTGAGGTACAGAGAGATTCCTGGGAAACTCTGCGCTCTCACCACTAAAATCCAAGAATTGAAGCGAAGGGTGGCTTCTGGTGAAACTAGTAATGTAGATTACTATGCTCTGATTGGGTTGCGACGTGGGTGTTCCAGATCGGAGTTGGAGAGAGCTCATCTATTGCTCTGTTTACGACACAAGCCTGATAAAGCTACCAACTTTATTGATCGGTGCGAGCTTGGGGACGAACGTGATCTTGAATCAGTCAAGGACAGAGCAAAAATGTCATCTGTGTTACTCTACAGATTGCTTCAGAAGGGTTATACAAGTGTAATGACTACCATAATGGACGAGGAAGCTGCTGAAAAACAGAGAAAGAAAGCAGCTGCTGCATTACAAGCCGCACAAGCAGCGGAGTCCAGATTGGAGTCTGATTTGAATGTCTCAGAGAAATTGGGTAGCAATAGGAGTAATTGTTCAGTGGAAAATAAACCCACAGTGTCTTCTTCGACTGCGAATTCGTCGGTTTTCCAAGGTGTATTTTGCCGTGATCTTGCCGTTGTTGGAAATTTGCTTTCGCAAGCGGGATTTAACCATCCAATTCCGGTGAAGTATGAGGCGTTGAGCTGCTAA 1704 0.5006 MAVTAPSPNATEKKHWWLTNRKIVEKYIKDARTLMATQEQSEITAALNLLDAALAISPRLDQALELKARSLLFLRRFKEVADMLQDYIPSLKMANEDSASFSSDNSSQQLSREGVKLLSSSSELQGRDQGFKCFSVSDLKKKVMAGLCKSGNKEGQWRYLVLGKACCHLGLMEDAMVLLQTGKRIASDAFRRESICWSDDSFSLSTNPFSCDATNPPPTTIPRTPLTESESVTQLLSHIKLLRCRRTAALAALDAGLYSEAIRHFSKIVDGRRSAPQGFLAECYMYRASAYRSAGRIAESIADCNRTLALDPSCIQALDTRASLLETIRCLPDCLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKRRVASGETSNVDYYALIGLRRGCSRSELERAHLLLCLRHKPDKATNFIDRCELGDERDLESVKDRAKMSSVLLYRLLQKGYTSVMTTIMDEEAAEKQRKKAAAALQAAQAAESRLESDLNVSEKLGSNRSNCSVENKPTVSSSTANSSVFQGVFCRDLAVVGNLLSQAGFNHPIPVKYEALSC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3476 567 Gene3D Tetratricopeptide repeat domain 226 354 IPR011990 GO:0005515
Dere01g3476 567 CDD DnaJ 396 430 IPR001623 -
Dere01g3476 567 Gene3D DnaJ domain 381 529 IPR036869 -
Dere01g3476 567 SMART tpr_5 281 314 IPR019734 GO:0005515
Dere01g3476 567 Coils Coil 475 498 - -
Dere01g3476 567 SUPERFAMILY TPR-like 247 342 IPR011990 GO:0005515
Dere01g3476 567 SUPERFAMILY Chaperone J-domain 392 430 IPR036869 -
Dere01g3476 567 PANTHER OS01G0273500 PROTEIN 9 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3476 Dere-ChrDere01 49232376 49234803 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3476 01 49232376 49234803 Dere02g0490 02 4807061 4809407 CCT
Dere01g3476 01 49232376 49234803 Dere01g3476 01 49232376 49234803 ECH