Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0447 ATGGTTGTGCCTTCCGTTCGAAGCAAGAAAACAAAGGCCGTGGGAATTCCGACCATCGACCTTTCCTTGGAAAGGTCAGAGTTGTCGCAACTAGTGGTGAAAGCCTGCGAGCAATATGGTTTCTTCAAGGTGGTCAACCACGGCGTGCCAAAGCAGGTCATTTCGAGATTGGAGGAGGAAGGCATTCAATTCTTTGCCGAACCCATCTCCGAGAAGCGAAAAGCTGGCCCCGCTACCCCTTTTGGTTATGGTTTCAGAAACATTGGCTCCCACGGCGATATGGGTGAGCTTGAGTATCTTCTCCTTCATACCAATCCTCTCTCCATCTCTCAGAATTCCAAAACCATCTCAAACGACCCCACCAAATTCAGCCGTGCGGTGAATGAGTATATAGAGGCAGCAAGGGAAGTAGCATGCGAGATACTGGATCTAGTGGCAGAGGGTCTGTGGGTTCCGGACAAGTTCGCGCTGAGCACTCTAATCAGAGACGCCCACAGCGACTCGGTGCTCAGGTTGAACCACTACCCTGCCACCACTCCCACCCACAACAGCAGCAACAACACTAATAATGATAGCAGCATTGGGTTTGGGGAACATTCTGACCCTCAGATTCTGACCATCCTACGCTCCAACGACGTCAGTGGCCTTCAGATCTCCACCCACGACGGTTTCTGGATCCCCGTCCCCCCCGACCCCTCTGAGTTCTTTGTCATGGTGGGCGATGCCCTCCAGGTTTTGACGAACGGAAGATTTAGAAGCGTGAGGCACAGAGCGGTGACAAACACGGGCAAGCCCAGACTGTCGATCATGTACTTTGGAGCACCAGCTCCTAATTCCTGGATCACTCCCCTCCCAATCACGCTCTCACCACACAAACAGCCTCTCTATAAGCCCTTCACATGGGCTCAATACAAACAAGCAGCCTACTCTCTCCGCCTCCGTGACTCTCGCCTCGACCTCTTTAGAGCTCAGGATGCTCCCCACCACCTCATCACTGCCTCTCCCTGA 1008 0.5308 MVVPSVRSKKTKAVGIPTIDLSLERSELSQLVVKACEQYGFFKVVNHGVPKQVISRLEEEGIQFFAEPISEKRKAGPATPFGYGFRNIGSHGDMGELEYLLLHTNPLSISQNSKTISNDPTKFSRAVNEYIEAAREVACEILDLVAEGLWVPDKFALSTLIRDAHSDSVLRLNHYPATTPTHNSSNNTNNDSSIGFGEHSDPQILTILRSNDVSGLQISTHDGFWIPVPPDPSEFFVMVGDALQVLTNGRFRSVRHRAVTNTGKPRLSIMYFGAPAPNSWITPLPITLSPHKQPLYKPFTWAQYKQAAYSLRLRDSRLDLFRAQDAPHHLITASP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0447 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 283 IPR005123 -
Dere02g0447 335 MobiDBLite consensus disorder prediction 176 196 - -
Dere02g0447 335 FunFam Gibberellin 2-beta-dioxygenase 2 2 312 - -
Dere02g0447 335 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 307 - -
Dere02g0447 335 Pfam 2OG-Fe(II) oxygenase superfamily 167 273 IPR044861 -
Dere02g0447 335 SUPERFAMILY Clavaminate synthase-like 8 314 - -
Dere02g0447 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 16 88 IPR026992 -
Dere02g0447 335 Gene3D - 2 313 IPR027443 -
Dere02g0447 335 PRINTS Isopenicillin N synthase signature 32 49 - -
Dere02g0447 335 PRINTS Isopenicillin N synthase signature 199 220 - -
Dere02g0447 335 PRINTS Isopenicillin N synthase signature 235 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0447 Dere-ChrDere02 4394833 4397042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0447 7 309 Glycosyltransferase AT5G59530 27.302 4.95e-26 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3521 01 49602484 49605438 Dere02g0447 02 4394833 4397042 CCT
Dere02g0447 02 4394833 4397042 Dere02g0447 02 4394833 4397042 ECH