Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0427 ATGGAGACCTTTCTTTTCACTTCTGAATCTGTCAATGAGGGTCACCCTGACAAGCTGTGCGACCAGATCTCAGATGCAGTGCTTGATGCCTGCCTCGAACAGGACCCTGACAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACAACCAAGGCCAATATAGACTACGAGAAGATTGTCCGTGATACTTGCCGCAGCATTGGATTTGTCTCTGATGAGGTGGGTCTTGATGCTGACAAATGCAAGGTATTGGTGAACATTGAGCAACAGAGCCCTGATATTGCCCAGGGTGTGCACGGCCACTTTACCAAGCGCCCAGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGGTATGCCACAGATGAAACCCCTGAATACATGCCCTTGAGCCATGTCCTTGCGACAAAGTTGGGAGCTCGCCTTACTGAGGTTAGGAAGAATGGTACCTGCGCTTGGCTGAGACCCGACGGTAAAACACAAGTAACTGTTGAGTACTATAATGACAATGGAGCTAGGGTTCCAGTTCGTGTCCACACTGTCCTCATTTCAACTCAGCACGATGAGACTGTCACTAATGACCAAATTGCTGCTGATCTTAGGGAGCATGTTATTAAGCCTGTCATCCCCGAGAAATATATAGATGACAAGACCATCTTTCACCTTAACCCTTCTGGCCGCTTTGTCATTGGTGGCCCTCATGGGGATGCTGGTCTGACTGGAAGGAAGATTATTATTGATACTTATGGTGGCTGGGGTGCCCATGGTGGTGGTGCTTTCTCCGGGAAGGACCCTACTAAGGTTGATAGAAGTGGTGCTTATGTTGCAAGGCAAGCCGCAAAGAGTATAGTGGCAAATGGGCTTGCTCGCAGGTGCCTTGTGCAAGTCTCGTATGCCATTGGTGTTCCTGAGCCCTTGTCCGTTTTTATTGAGTCCTATGGAACTGGAAAGATTCCAGACAAGGAGATTCTTCAAATTGTGAAGGAGAATTTCGACTTTAGGCCTGGAATGATCACCATTAACTTGGACCTTAAGAGGGGTGGCCATAGGTTCCTCAAGACAGCTGCTTATGGACACTTTGGAAGGGATGACCCAGACTTCACCTGGGAAGTTGTGAAGCCACTCAAGTGGGAAAAGCCCCAGGCTTAA 1179 0.4894 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANIDYEKIVRDTCRSIGFVSDEVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDNGARVPVRVHTVLISTQHDETVTNDQIAADLREHVIKPVIPEKYIDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFIESYGTGKIPDKEILQIVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0427 392 Gene3D - 11 279 - -
Dere02g0427 392 FunFam S-adenosylmethionine synthase 117 136 - -
Dere02g0427 392 PIRSF MAT 1 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Dere02g0427 392 Hamap S-adenosylmethionine synthase [metK]. 2 392 IPR002133 GO:0004478|GO:0005524|GO:0006556
Dere02g0427 392 FunFam S-adenosylmethionine synthetase 1 11 116 - -
Dere02g0427 392 FunFam S-adenosylmethionine synthase 262 380 - -
Dere02g0427 392 Gene3D - 4 242 - -
Dere02g0427 392 NCBIfam methionine adenosyltransferase 5 385 IPR002133 GO:0004478|GO:0005524|GO:0006556
Dere02g0427 392 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 389 IPR002133 GO:0004478|GO:0005524|GO:0006556
Dere02g0427 392 Pfam S-adenosylmethionine synthetase, C-terminal domain 240 380 IPR022630 GO:0004478|GO:0006556
Dere02g0427 392 SUPERFAMILY S-adenosylmethionine synthetase 115 239 IPR022636 GO:0004478|GO:0006556
Dere02g0427 392 ProSitePatterns S-adenosylmethionine synthase signature 2. 266 274 IPR022631 GO:0004478|GO:0006556
Dere02g0427 392 Pfam S-adenosylmethionine synthetase, central domain 117 238 IPR022629 GO:0004478|GO:0006556
Dere02g0427 392 SUPERFAMILY S-adenosylmethionine synthetase 240 389 IPR022636 GO:0004478|GO:0006556
Dere02g0427 392 SUPERFAMILY S-adenosylmethionine synthetase 3 109 IPR022636 GO:0004478|GO:0006556
Dere02g0427 392 Gene3D - 117 380 - -
Dere02g0427 392 FunFam S-adenosylmethionine synthase 137 241 - -
Dere02g0427 392 ProSitePatterns S-adenosylmethionine synthase signature 1. 119 129 IPR022631 GO:0004478|GO:0006556
Dere02g0427 392 CDD S-AdoMet_synt 5 383 - -
Dere02g0427 392 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 101 IPR022628 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0427 Dere-ChrDere02 4242472 4243650 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3645 01 50719859 50723004 Dere02g0427 02 4242472 4243650 ECH
Dere02g0427 02 4242472 4243650 Dere02g0427 02 4242472 4243650 ECH