Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02785 ATGGAATACAGAACGCTCGAACTCATCCTCGACTCGGCCAAGGATCTCAAGGATCTCAATCTCTTCTCCAAGATGGACGTCTACGCCGTCGTTTCGCTCTCCGGCCACCACAAGATCAAGACCCCCGTTGACCGGAACGCCGGTACCAACCCCACCTGGAATTTTCCAGTCAAGTTCACCTTCAGCGAATCGCTCGCGCGCCAGAACCGCTTATCCCTCGAAATCAATCTCCACTGCGAGCGCACCCTCGCCGCCGACAAGGACATCGGGCAAGTCCACGTGCCGCTCCGGGAACTCCTCGACCAAGCCGGCGACGGAAAATCCTTTCAGCACGTGAGTTACCAGGTCAGAAAACCCTCCGGGAAGCCTCAGGGAGCCTTCAATTTCTCCTACAAATTCGCCGATAAATTCGCCGCTCCGGCCAAAGcgtcagcgtcagcgtcaacgtcaacgtcaacgtcaTCGCCGGCGGCGGCGGTCACTAAGGTGGAACCGGTCACGGCTTATCCTGCTCCGGTGGTGGGGTCCACCTCTGCTCCGTATCCCATCGTGTACCCTCAGCCGCAATATGCGGGTGGATATGGGTATCCTCCGCCGCCGGCTCAAGCGGGTTACGCATACGCGCCGCAACCGGCCCACGCCTACCCGGCCCAGGCGGGTTATGGGTACCCGGCCCAAGCGGGTTACGGATACGGGTACCCTCCTCCTCCACGTGCTCCGGCGAAGAACAAATTTGGAATGGGATTGGGAGCGGGGTTGCTCGGAGGAGCGTTGGGTGGGCTTTTGATTGGGGACATCATATCTGATGTTGCTTTTGATGATGCCTTTGGTGGATTTGAtttttag 846 0.5603 MEYRTLELILDSAKDLKDLNLFSKMDVYAVVSLSGHHKIKTPVDRNAGTNPTWNFPVKFTFSESLARQNRLSLEINLHCERTLAADKDIGQVHVPLRELLDQAGDGKSFQHVSYQVRKPSGKPQGAFNFSYKFADKFAAPAKASASASTSTSTSSPAAAVTKVEPVTAYPAPVVGSTSAPYPIVYPQPQYAGGYGYPPPPAQAGYAYAPQPAHAYPAQAGYGYPAQAGYGYGYPPPPRAPAKNKFGMGLGAGLLGGALGGLLIGDIISDVAFDDAFGGFDF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02785 281 Pfam C2 domain 6 109 IPR000008 -
Cca11g02785 281 SMART C2_3c 5 108 IPR000008 -
Cca11g02785 281 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Cca11g02785 281 CDD C2_SRC2_like 5 129 IPR044750 GO:0006952
Cca11g02785 281 PANTHER INGRESSION PROTEIN FIC1 1 271 - -
Cca11g02785 281 PANTHER OS01G0934100 PROTEIN 1 271 - -
Cca11g02785 281 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 135 IPR035892 -
Cca11g02785 281 Gene3D C2 domain 2 162 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02785 Cca-Chr11 55189861 55190706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02785 - - aprc:113847350 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02785 11 55189861 55190706 Cca11g02785 11 55189861 55190706 ECH
Cca11g02785 11 55189861 55190706 Cca08g01660 08 48298079 48300126 PCT