Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02744 atggccatcactcatctcactcaccaatccgattTTCAAGCCTTAGCCTCTCCATATGGAGACGACGGTTACATCTCCATTTGCGGCTACGGTTCCCTCCTCTCCGAGACAAGTGCCAGATCCACTTTCCCTGACCTTCTTAACTTCCGAAACGCCCGGCTAACCGGAACGGCGTTGCCAACATCAAAACTCAGGAAATTGCAGGACTCTCTGCTGAACGGTGAAATTATTGTTGTAACTGTTTTTGAGATAAAGAAAACAGAGATTCCAGCCTTTATTGAAAGAGAGCGCGAATATCGTTTTTTAGCTGTTGTTCCTGAATCACTAGATGGGAAGCCCTTTCCTAATCCAGCCGTTCTCTGTGCTTCTTACACTGATGAAGAATTCTTTAAATTTAGATGCACCGAGGGCAGGGAAAAATATTTTGAACAATTTGAAGAATATAAAATCCATAAGATTTGGCGCGATGATGTTTTACCATGTCGTGTTTATCTTCGTCATTGTGTCCTGGCTGCAAAAGGACATGGGGATGAAGTCTACAATAACTTTTTGGATCATACCTTCCTTGGTGACCGTAGAACGACCATACGTCAGTACTTTGAAAAAGTGGGAACAAACATCATGGAAGAAGAGCCACCTGAGTCTTTGAAAACTCGTTATGGTGGTTGA 669 0.4081 MAITHLTHQSDFQALASPYGDDGYISICGYGSLLSETSARSTFPDLLNFRNARLTGTALPTSKLRKLQDSLLNGEIIVVTVFEIKKTEIPAFIEREREYRFLAVVPESLDGKPFPNPAVLCASYTDEEFFKFRCTEGREKYFEQFEEYKIHKIWRDDVLPCRVYLRHCVLAAKGHGDEVYNNFLDHTFLGDRRTTIRQYFEKVGTNIMEEEPPESLKTRYGG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02744 222 PANTHER OS05G0358400 PROTEIN 71 222 - -
Cca11g02744 222 PANTHER OS05G0358400 PROTEIN 4 57 - -
Cca11g02744 222 PANTHER GAMMA-GLUTAMYL CYCLOTRANSFERASE-RELATED 71 222 - -
Cca11g02744 222 PANTHER GAMMA-GLUTAMYL CYCLOTRANSFERASE-RELATED 4 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02744 Cca-Chr11 54811974 54814904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02744 - - gmx:100527697 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02744 11 54811974 54814904 Cca11g02744 11 54811974 54814904 ECH
Cca11g02744 11 54811974 54814904 Cca08g01715 08 49037287 49040048 PCT