Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01715 ATGAACATAGCAAGTAGCAGTAGCAGTAGCACCACTTCCGTTAACTTCCCCTTCCAACTctcgccactcgcctctcgcgcgtcccaccaacgcgccactctctccctcgTTTCCCCCAAAACCGCCATGTCTCTCCGATCATCACCCTATCCAGTCGCCGAACTCAGCCACCACTCCGACTTCGAACCTCTCCTCTCTCCCGACGGTTACATCTCCATCTGCGGCTTCGGCTCCCTCCTCTCCGAGAGAAGCGCGCGAAGCACTTTCCCCGATTTGGCTAACTTCAGAACCGCAAGGCTCAACCGCTTCCGCCGCGTCTTCGCTCACGTCGCTCCGGTTTTCTTCGAGCGCGGCATCGCCAAGCCCCAAACCATGGAGATTTCCAGCTTGAGTGTGGAGCCCTGTGAAGGAGAAACTCTTGTCGTAACAGTCTTTGAGATCAGAAAATCAGAGATTCCAGATTTTATCAAGAGGGAGGTTGAGTTTCGGTTTCTTGCTGTAAGCTTGTAG 510 0.4784 MNIASSSSSSTTSVNFPFQLSPLASRASHQRATLSLVSPKTAMSLRSSPYPVAELSHHSDFEPLLSPDGYISICGFGSLLSERSARSTFPDLANFRTARLNRFRRVFAHVAPVFFERGIAKPQTMEISSLSVEPCEGETLVVTVFEIRKSEIPDFIKREVEFRFLAVSL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01715 169 PANTHER OS05G0358400 PROTEIN 21 168 - -
Cca08g01715 169 PANTHER OS05G0358400 PROTEIN 21 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01715 Cca-Chr8 49037287 49040048 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01715 - - gmx:100781602 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01715 08 49037287 49040048 Cca08g01715 08 49037287 49040048 ECH
Cca11g02744 11 54811974 54814904 Cca08g01715 08 49037287 49040048 PCT