Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02742 ATGGCCACCGCTGCCGGAGCGGCGGCCATGCTGTACCTCATCTTCAGCCGGAGGAGGAAGGTCGAAGAGGAGTGGTCCAGGTCCTCGACGTGGAGGGTGAACCCAGCTCAGGCGCCGGCGAATGTGTTCGAATCGATTTCCATGTTGTCGGAGACGCTGAGGTTCACTTACTCCGAGACTCTCGGCAAATGGCCAATCGCCGACTTGGCCTTCGGCGTCAATTACTTTATGCGGAGACAGGGTGATTTGGCGGTTGCGAGTGTGTATGGTGGAAGCGGTTGCGTGGAGCTAAAGGGCCCCGAAGTTGTAGCGGAGTTACAAGAGCTCAACAGGTTGTTGACGTTGTGCATGCTTTTCTCGAAGAAACCATTTCAAGACTTTTTAAATTCCGCTGGATTCTCCCAGGACCGTGTCCTTCTTCACAATCCCAAAGCTGAGCTTCTGAAGCCCGCTTTCACAATTATACATGATACACAATCAAAATGTTTCCTTCTATTGATCCGGGGAACACATAGCATAAAAGACACCTTGACAGCTGCAACTGGTGCCGTGGTTCCCTTTCACCATTCTATTTTAAATGATGGAGGGGTAAGCAACTTGATTTTAGGATATGCACACTGTGGTATGGTTGCTGCAGCTCGTTGGATTGCAAAACTCTGCACTCCTACACTACTTAGGGCTCTTGATGAATGTCCTGATTCAAAAGTCAAGATTGTTGGACACTCACTTGGCGGTGGTACTGCAGCACTGTTAACATATATTCTTAGAGAACAAAAAGAATTATCTTCAAGCACTTGTGTCACATTTGCCCCAGGCATAGCTTTTCATTTTGTCATTTTTGCAGCTTCCTGTATGACATGGGAGTTAGCTGAATCAGGGAAGCACTTTATCACTACCATTATAAATAATTCTGACTTGGTACCCACATTATCAGCTTCTTCTGTTGATGATCTGCGCACTGAGGTTGCTGCGTCATCTTGGTTGAATGATTTATGGGATCAAGTTGAGCATACAAAGGTTCTGAATGTCGTCTGTCGCTCAGCAACTGCACTTGGATCTCACTTCCAATCTATATCTAGTGCAAAAGACAAGGTAACTGGTGTAGTTGCTATTCTACGGCCAGTAACCAGTGGCACCCAGAATGTGATGAAGTGTGCACAAACCGTTGTCAAATCTGTTATCAAAACTATGGCCGCACACAGTCGAAATATTCGTTCATTTCCAAAATCTAAATTAGATAACTTGGCTCAAACTTCTCTGGTACATGAAAATATAAGTAAATCTTTTTTGACTGAATGTGCGCCTGTGTTGAATAAGGATGAACCAAACTCCTCAAGTGGAAGATCTGGACTTGATGCCATATATGAAGAGGAACAAGTCACTTTTAGCAACGAGTACATTACCCCTCCTGTGGGAGATAACATCAGCGAAGGTGAACTGTGGTATGAGCTGGAGAGGGAACTCAAAAAATCGAATAATACCCTGGACATTCATGCTCATGTAGAAGAGGCAGCTGCAGCAAAAGAGATAACCAAAGAAGAGAATCAGCTTATTGATGCTGCACAAAGTAGCAATTCAATCACAGCATCCGACAACATAGACAGCTATCGATTTTATCCCCCAGGAAAAATCATGCATATTGTTTCCACACCATCTGATGACTCTAGTTCAAACTTCATTGAAGAACATGCCAAATTATATGAAACTCCTAGACAGTTGTATAGCAAGCTCAGACTTACAAAATCGATGATAAATGATCATTACATGCCAACGTATAGGAAGATGATCCAACTATTAATCCAACAACTAGATAAGGATGATAAAGTGAAATAG 1833 0.4375 MATAAGAAAMLYLIFSRRRKVEEEWSRSSTWRVNPAQAPANVFESISMLSETLRFTYSETLGKWPIADLAFGVNYFMRRQGDLAVASVYGGSGCVELKGPEVVAELQELNRLLTLCMLFSKKPFQDFLNSAGFSQDRVLLHNPKAELLKPAFTIIHDTQSKCFLLLIRGTHSIKDTLTAATGAVVPFHHSILNDGGVSNLILGYAHCGMVAAARWIAKLCTPTLLRALDECPDSKVKIVGHSLGGGTAALLTYILREQKELSSSTCVTFAPGIAFHFVIFAASCMTWELAESGKHFITTIINNSDLVPTLSASSVDDLRTEVAASSWLNDLWDQVEHTKVLNVVCRSATALGSHFQSISSAKDKVTGVVAILRPVTSGTQNVMKCAQTVVKSVIKTMAAHSRNIRSFPKSKLDNLAQTSLVHENISKSFLTECAPVLNKDEPNSSSGRSGLDAIYEEEQVTFSNEYITPPVGDNISEGELWYELERELKKSNNTLDIHAHVEEAAAAKEITKEENQLIDAAQSSNSITASDNIDSYRFYPPGKIMHIVSTPSDDSSSNFIEEHAKLYETPRQLYSKLRLTKSMINDHYMPTYRKMIQLLIQQLDKDDKVK 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02742 610 CDD Lipase_3 157 311 - -
Cca11g02742 610 Pfam Lipase (class 3) 165 312 IPR002921 GO:0006629
Cca11g02742 610 SUPERFAMILY alpha/beta-Hydrolases 132 313 IPR029058 -
Cca11g02742 610 Pfam Lipase 3 N-terminal region 35 109 IPR005592 GO:0016042
Cca11g02742 610 Gene3D alpha/beta hydrolase 103 367 IPR029058 -
Cca11g02742 610 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 607 - -
Cca11g02742 610 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02742 Cca-Chr11 54799993 54806309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02742 1 606 Acyl Lipid Metabolism Gene Families AT4G16070 54.559 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02742 - - gmx:100801263 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02742 11 54799993 54806309 Cca11g02742 11 54799993 54806309 ECH
Cca11g02742 11 54799993 54806309 Cca08g01716 08 49041680 49047245 PCT