Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01716 ATGGCGGCGGGGACAATGGCGACGGCGGCCGGTGCGGCGGTGATGCTGTACTACGTCCTGAGCCGGCGGCTGGGGAAGAAGGCGGAGGACGATGATGAGGATCACGTCGCCGGTGGCGACCTGTCGAAATCCAGCAGATCGGTTCGCCGGAAGAGACTTTCCCGGCGGCCGGCGCAGGCGCCGGCGACGCTGCTGGAGTCGATCGTGACGCTGTCGGAGACTTTGAGGTTCACGTATTCCGAGACCCTCGGGAAGTGGCCCATCGGAGATTTGGCCTTTGGCATCAACTACTTCATGCGCAAACAGGGTAATTTGGCAGTTGCAAGTGTGTATGCTGGGAGTGATTGTGTGCAGCTCAAAGGGGATGACATAATTGTGGAGCTGTATGAACTGTTGAGGCTTTTGACTTTGTGTATGCTTTTCTCCAAGAAGCCATTTCCTGTGTTTTTAGATTCTGCTGGGTTTTCCCTTGATGATGTGCTCATTCAGAAGCCAAAAGCTGGGCTTCTGAAGCCTGCATTCACAATTATACGTGATACACAGTCAAAATGTTTACTTCTATTGATCCGGGGTACTCATAGCATAAAAGACACACTGACAGCTGCAACTGGTGCTGTTGTCCCATTCCACCATTCAGTTTTAAATGATGGTGGGATAAGCAACTTGGTTTTAGGATATGCACACTGTGGCATGGTTGCTGCAGCTCGTTGGATTGCTAAGCTCTGCACTCCTACCCTACTTAAGGCTCTTGGTGAATGTCCAGACTTCAAAGTCAAGATTGTTGGGCACTCACTTGGTGGTGGTACTGCTGCACTGTTAACATATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACATGTGTCACATTTGCCCCAGCTGCTTGTATGACATGGGAGTTAGCAGAATCAGGAAAACACTTTATTACTACCATTATAAATGGTTCTGACTTGGTGCCAACATTCTCAACTTCATCTATTGATGATCTCCGTTCTGAGGTCACCGCATCCTCTTGGTTGAATGATCTACGTGATCAGGTTGAACATACAAAGGTACTAAATGTTGTCTACCGCTCTGCAACTGCACTTGGATCTCGCTTACCATCTATATCTAGTGCAAAAGCTAGGGTTGCTGGTGCTGGTGCTATTCTGTGGCCGGTAACCAGTGGTACCCAGGTTGTGATGAAGCGTGCACAAAGTGTTGCTGAAGCTGTTGTCAGAACTCGTTCATCATTGTCATCATGGTCTTGCATGAGTGCACGCCGCAGAAACGTGGGTACATCTTTAAACTCTAAAGCAGAGGACATAACTGAAGCCTGTCTAATATCCGAGAGAAGCACAGAAACTCTTATGACTGAAGAGAAACACCTCATCCCTGCTAATGAAGACATTACCGCATCCGCTGTCAGTGATTTCACGGAAGGCCAATTATGGTACGAACTGGAGAAGGAGCTTCAGAAACAGGATAATGCGATGAACATTCATGCTCAAGAAGAAGAGGCTGCAGCAGCAAAAGAGATCACAGAAGAAGAGAATCAACTTGTTGATGCTGCTGAATGCAGTAGCAATTCAATCACAACATCAGACAACATGGACAGCCATAGGTTTTATCCCCCTGGTAGAATCATGCATATTGTTTCGGTACCTTCATCGGATGAGTCGAATTCAGGTTCTGATGACCCTGTAGAAGAACATGTCTGCTTGTATGAAACACCTAGAGAGCTGTACAGCAAGCTCAGACTATCAAAAACCATGATAAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATACGAGAACTTGAGAAAGATAGCAGCTGTGCTATTTTGAATTAA 1848 0.4665 MAAGTMATAAGAAVMLYYVLSRRLGKKAEDDDEDHVAGGDLSKSSRSVRRKRLSRRPAQAPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLAVASVYAGSDCVQLKGDDIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVGTSLNSKAEDITEACLISERSTETLMTEEKHLIPANEDITASAVSDFTEGQLWYELEKELQKQDNAMNIHAQEEEAAAAKEITEEENQLVDAAECSSNSITTSDNMDSHRFYPPGRIMHIVSVPSSDESNSGSDDPVEEHVCLYETPRELYSKLRLSKTMINDHYMPMYKKMMELLIRELEKDSSCAILN 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01716 615 MobiDBLite consensus disorder prediction 29 47 - -
Cca08g01716 615 SUPERFAMILY alpha/beta-Hydrolases 157 325 IPR029058 -
Cca08g01716 615 Pfam Lipase (class 3) 187 323 IPR002921 GO:0006629
Cca08g01716 615 CDD Lipase_3 178 329 - -
Cca08g01716 615 MobiDBLite consensus disorder prediction 29 55 - -
Cca08g01716 615 Gene3D alpha/beta hydrolase 158 359 IPR029058 -
Cca08g01716 615 Coils Coil 493 513 - -
Cca08g01716 615 Pfam Lipase 3 N-terminal region 52 119 IPR005592 GO:0016042
Cca08g01716 615 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 609 - -
Cca08g01716 615 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01716 Cca-Chr8 49041680 49047245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01716 1 609 Acyl Lipid Metabolism Gene Families AT4G16070 65.419 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01716 - - gmx:100782138 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01716 08 49041680 49047245 Cca08g01716 08 49041680 49047245 ECH
Cca11g02742 11 54799993 54806309 Cca08g01716 08 49041680 49047245 PCT