Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02725 ATGGCAGTCACACATGCTGACCTTGAACCAAGTCGAGGAAAAACGGATTTGAGTAGCAAAACAGGTGTCTTACTTATGGTTCTCACAATCCTATTGGGCCTATTATGCTTCACTCTTTGTCTCGTAGCAGAAGCCACACGTTCTCAGGTCACGTGGATGAGCACAGCTGAAAATGGAAAGGGAAATAATAAATCTGAATGTGCGTACAGTGGTAGTGGGAAAATGCCATTGCTATGCGCTGTTTGTGCTTTCATTGCACTAGCAATTGCTATGCTGGTGGAGCACACTTTTATGCTCATCGCAGTTAGTAATTCGTCACCTGTATTACTCGCCTGGGATCCTGATTCTGCTTCTGCCAAATCGTTATCATGGCAAGCTGGAATTTTCTTCACTACAACTTGGATTTGCTTTGGAGTCGGGGAGATTCTGCTTTTGGCAGGAGTGAGTGTAGAGTCAGGCCATCTGAAGAATTGGTCCAAGCCTAGATCAAGTTGTCTTACCATCAGGCAAGGCTTGTTCTGTGCTGCAGGGGTGTTAGCTTTAACCACAGTCTTTCTAGCTTCTGCTTTATACCTAACGGCACTACGTGCCATAAGAATATCACGGGAGCAAGAAAATGTTCGACGGGAGGTGCTTATGACTTCTTCCCTCCATGCTTCTTCACCAAGAGCACCTCAACCACATTTCACCACTGTTTCTAGGGAGAACCCCACCCCTGGCGCGATGAAGGAAAATCCCGGGAATTTTGTGACGTTTGGACATTTTATCTTCCTTAACAACCCAATTCAGGGGAATTCGTCATAG 804 0.4577 MAVTHADLEPSRGKTDLSSKTGVLLMVLTILLGLLCFTLCLVAEATRSQVTWMSTAENGKGNNKSECAYSGSGKMPLLCAVCAFIALAIAMLVEHTFMLIAVSNSSPVLLAWDPDSASAKSLSWQAGIFFTTTWICFGVGEILLLAGVSVESGHLKNWSKPRSSCLTIRQGLFCAAGVLALTTVFLASALYLTALRAIRISREQENVRREVLMTSSLHASSPRAPQPHFTTVSRENPTPGAMKENPGNFVTFGHFIFLNNPIQGNSS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02725 267 Pfam Protein of unknown function (DUF1218) 83 184 IPR009606 -
Cca11g02725 267 PANTHER OS05G0433100 PROTEIN 7 230 - -
Cca11g02725 267 MobiDBLite consensus disorder prediction 219 238 - -
Cca11g02725 267 PANTHER OS07G0462200 PROTEIN-RELATED 7 230 - -
Cca11g02725 267 MobiDBLite consensus disorder prediction 219 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02725 Cca-Chr11 54626488 54628016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02725 - - gmx:100804457 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02725 11 54626488 54628016 Cca11g02725 11 54626488 54628016 ECH
Cca11g02725 11 54626488 54628016 Cca08g01733 08 49253133 49255516 PCT