Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01733 ATGGCACAGAGAATGGCAGTCACACATGCAGACCTTGAACCAAGCAGAAGCAAAACAGATTTGAGTAGCAAAACAGGTGCCTTCCTTATGGTCCTCACAATTCTAATAGGCCTCTTCTGCTTCATCCTATGTCTCATAGCAGAAGCCACACGTTCTGAGGTGACATGGATGGACACAGGTGGGAAAGAAAACGGAGGCAAATCTGAATGTGTTTATAGCGGAAGTGGGAAAGTGCCATTGCTATGTGCTGCTTTTGCTTTTGTTGGACTTGCATTTGCCATGGTCATGGAACATACTTACATGTTGATAGCAGTGACTAAATCATCACCTTCTTTGCTTACATGGGACCCTGATTCTCCTTCTGCCAGGTCCCTAACATGGCAGGCAGGGTTTTTCTTCATTGCAACTTGGATTTGTTTTGCAGTTGCGGAGATTTTGTTGTTGGCAGCACTTAGTGTAGAGTCAGGGCATCTGAAGAACTGGTCTAAGGCAAGAAACGGTTGCTACAGCATCAGAGAAGGGGTGTTCTCTGCTGCTGGTGTGTTTGCTTTAACCACAGTTTTCTTGGCTGCTGGTTTATATCTAACAGCACTACGAGCACAAAGAATGTCAGAGGAACTAGCAAATGTTCGAAGAGAGGTTCTAGAAGCCTCTGCATTCTATGCTTCTCCACCAAGGTCACCTCAACCACAATACATCTCAACAATTGCCAGGGAGAACCCCACAACCAGAGAGACCCCGAATGAGCTTCTGTTATCTGTGTTTCCAACTCCATTCGTCAAAAGTCACAACTTTGCATAA 801 0.4532 MAQRMAVTHADLEPSRSKTDLSSKTGAFLMVLTILIGLFCFILCLIAEATRSEVTWMDTGGKENGGKSECVYSGSGKVPLLCAAFAFVGLAFAMVMEHTYMLIAVTKSSPSLLTWDPDSPSARSLTWQAGFFFIATWICFAVAEILLLAALSVESGHLKNWSKARNGCYSIREGVFSAAGVFALTTVFLAAGLYLTALRAQRMSEELANVRREVLEASAFYASPPRSPQPQYISTIARENPTTRETPNELLLSVFPTPFVKSHNFA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01733 266 PANTHER OS07G0462200 PROTEIN-RELATED 11 235 - -
Cca08g01733 266 Pfam Protein of unknown function (DUF1218) 86 187 IPR009606 -
Cca08g01733 266 PANTHER OS05G0433100 PROTEIN 11 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01733 Cca-Chr8 49253133 49255516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01733 - - lang:109333801 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01733 08 49253133 49255516 Cca08g01733 08 49253133 49255516 ECH
Cca11g02725 11 54626488 54628016 Cca08g01733 08 49253133 49255516 PCT