Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02690 ATGGGTATCCATTTGAACAGGTTCATCATTGTTACGATTCTGCTTCGAGTTTCCGTAGTCTTGGTCTTGTTCACCATTTTTTCAACCTCAGACGATGTCCCTGCAAATTTTGTATTCGGAGATTCCCTTGTTGATGCTGGAAACAATAACTATCTTGTTTCCCTCTCAAAGGCTAATTATTTACCCAATGGCATTGATTTTGGAAGACCAACGGGGAGGTTCACTAATGGAAGAACCATTGTCGACATCGTTGGTGAGGAATTAGGTATCGGTTTCACCCCACCTTATTTGGCACCCACCACAGTTGGGCCAGTGATTCTGAAGGGTGTTAATTATGCCTCTGGTGGAGGTGGAATTCTTAATCTCACTGGAAAAGTCTTTGGTGGAAGACTCAACTTTGATGCACAGATAGATAATTTTGCAAATACCAGACAAGACATCATAGGCAGCATTGGCGTTCCAGCGGCTCTTAATCTATTCAAAAGGTCATTGTTTTCCGTGACCATTGGCTCAAACGATTTCATAAACAACTACTTAACACCATCACTCACATTTTCGGATCAGAAGGCCGCGTCACCTGAATTCTTTGTCACCACCATGATATCAAAACTCAGACTTCAGCTCACTAGGTTATTCAACCTAGGAGCTAGAAAAATTGTTGTGGCAAATGTAGGGCCTATTGGGTGTATACCAAGTCAGAGAGATGCAAACCCAGGTGCAGGAGATAGCTGTGTTGTTTTCCCTAATCAGCTAGCACAGCTTTTCAACACACAGTTAAAGGGTCTTATTGCAGAACTCAACTCAAATCTGGAGGGTTCAATGTTTGTTTATGCAGATGTCTACCGAATTTTAGAAGACATTCTCCTGAACTATGTAGTACTTGGTTTTGATAACCCGTCTTCCGCTTGCTGTCACGTGGCCGGGCGATTCGGAGGTTTGATCCCCTGTAGTCCCACATCGAGAGTTTGCTGGGACCGATCCAAATATGTGTTCTGGGACCCTTACCATCCTTCTGATGCTGTAAATGTTATCATCGCTAAGCGACTCTTAGACGGTGGTTCCAACGATATTTTTCCGGTCAACATTCGCGGACTCTTTCAATCTTAA 1107 0.4336 MGIHLNRFIIVTILLRVSVVLVLFTIFSTSDDVPANFVFGDSLVDAGNNNYLVSLSKANYLPNGIDFGRPTGRFTNGRTIVDIVGEELGIGFTPPYLAPTTVGPVILKGVNYASGGGGILNLTGKVFGGRLNFDAQIDNFANTRQDIIGSIGVPAALNLFKRSLFSVTIGSNDFINNYLTPSLTFSDQKAASPEFFVTTMISKLRLQLTRLFNLGARKIVVANVGPIGCIPSQRDANPGAGDSCVVFPNQLAQLFNTQLKGLIAELNSNLEGSMFVYADVYRILEDILLNYVVLGFDNPSSACCHVAGRFGGLIPCSPTSRVCWDRSKYVFWDPYHPSDAVNVIIAKRLLDGGSNDIFPVNIRGLFQS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02690 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 22 367 - -
Cca11g02690 368 SUPERFAMILY SGNH hydrolase 39 351 - -
Cca11g02690 368 Pfam GDSL-like Lipase/Acylhydrolase 37 348 IPR001087 GO:0016788
Cca11g02690 368 Gene3D SGNH hydrolase 24 354 IPR036514 -
Cca11g02690 368 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
Cca11g02690 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 22 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02690 Cca-Chr11 54311063 54312782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02690 33 368 Acyl Lipid Metabolism Gene Families AT4G10950 37.941 2.73e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02690 - - gmx:100791871 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02690 11 54311063 54312782 Cca11g02690 11 54311063 54312782 ECH
Cca11g02690 11 54311063 54312782 Cca08g01772 08 49875005 49879479 PCT