Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02662 ATGGTGTTGGAGTTGCTTTCTCCACCCTGCGAGCTTCCCGTTGTGGACCTCTCAGGCGAAAGGGCAGAGGTGGCAAAGGTCATTGTGAAAGCGTGCGAAGAGTTCGGTTTCTTCAAAGTGATAAACCATGGTGTGAGACATGCAGTCGTAGCTGAAGCTGAAGAAGAAGGCTTTACTTTCTTTAAGAAACCCATGGCACAGAAGAACCTTGCTGCACCTGCTTATGGCTGCAAGAACATTGGCTTCAATGGGGACATGGGAGAGGTCGAGTACCTTCTATTCGCTGCCAACACTCACTCCATTGCCAACATATCCAAAACTACATCAACCTTCAGGTGTAGGTTGAGTGCATACATAGAGGCAGTGAGGGAGGTGGCATGTAAGATATTGGAGCTAATGGCAGAGGGCCTGGGGGTCCCTGATAAAATGTTTTTCAGTAGGTTCATAAGGGATGTTGAAAGTGACTCAGTAATGAGGCTCAATCACTACCCACCAGACAAGTCACAATATAGCAAGGTTGGCTTTGGGGAGCATTCTGACCCTCAGATCTTAACCATTCTCAGATCCAACGACGTGGGTGGCCTCCAAATCTCCCTTCAACATGGACTCTGGATCCCGGTCACACCTGATCCCTCAGCTTTCTATGTCAACGTGGGTGATCTACTACAGGTTATGACAAATGGGAGATTTGTGAGCGTTCGGCACAGGGCTATGACAGAGTCACACTACAAGTGTAGAATGTCGGTGGCATATTTTGGGGCTCCACCTCTGCATGCAAGGATTGTTGCTCCCTCAGTTATGGTTACACCCCAGAGGCCCTCTCTTTTCCGACCATTCACTTGGGCCGAGTACAAGAAAGCCACATACTCTCTCAGGCTTGGAGACACACGCATTGACCTTTTCAGAAACCCTAAACTCTAG 921 0.4875 MVLELLSPPCELPVVDLSGERAEVAKVIVKACEEFGFFKVINHGVRHAVVAEAEEEGFTFFKKPMAQKNLAAPAYGCKNIGFNGDMGEVEYLLFAANTHSIANISKTTSTFRCRLSAYIEAVREVACKILELMAEGLGVPDKMFFSRFIRDVESDSVMRLNHYPPDKSQYSKVGFGEHSDPQILTILRSNDVGGLQISLQHGLWIPVTPDPSAFYVNVGDLLQVMTNGRFVSVRHRAMTESHYKCRMSVAYFGAPPLHARIVAPSVMVTPQRPSLFRPFTWAEYKKATYSLRLGDTRIDLFRNPKL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02662 306 Gene3D - 5 292 IPR027443 -
Cca11g02662 306 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 303 - -
Cca11g02662 306 SUPERFAMILY Clavaminate synthase-like 7 295 - -
Cca11g02662 306 Pfam 2OG-Fe(II) oxygenase superfamily 155 253 IPR044861 -
Cca11g02662 306 Pfam non-haem dioxygenase in morphine synthesis N-terminal 12 71 IPR026992 -
Cca11g02662 306 PANTHER PLANT GIBBERELLIN 2-OXIDASE 11 303 - -
Cca11g02662 306 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 153 255 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02662 Cca-Chr11 54017158 54022239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02662 11 302 Glycosyltransferase AT5G59530 27.885 2.52e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02662 K04125 - gmx:100783917 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02662 11 54017158 54022239 Cca11g02662 11 54017158 54022239 ECH
Cca11g02662 11 54017158 54022239 Cca08g01799 08 50231042 50238588 PCT