Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02593 ATGTTTAGATTAAAGAATTGTGAGGGCCCTGTGCGCTTCTTGTATCAGCAAACTAGGCAGCACCCTCACCGTAACAATCTTATGGCTTATTTAGTTGGTTATGATCCTTGTTCCCATTTGAGCAAGGCTTTTTCTCATTACCCTTCTCTATCTTCTTCTGCTCGTGGTAGCTGCCTGTCTTTCCCATTTCTCCAAAATCTTGTTTATGCTAATGTTTTTGGGGTTAGCAGAAGCATTGGTTTTGGGCCTAGAGGTTGTAGCAATGACACTAGTGGTAGTTGTAGTAGTTATAGTGACAGGATCCTTGTGAGGGCAAAGGCAAGGCCCCGTGGCTTTGTATCGAATCGTCGGCAACAGATGTTAGCGGATTTGGAGCAAGGGAATTCTGTAAGGAGCGATGAATGTGATGCTAATTTGGTTAAGGTTGATAATGGGTCTATAAATGGAAGTCCTGCCAAGCCTCCTTGTTTCAGTGATCACCGGTTGTCCCAGAAACttgttgttgctgttgatgttgatgAGGTATTAGGAAACTTTGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATACTCATCAAATTATTCAGTTTCTGAATATCATGTGTATGAATTCTGTAAGATATGGAATTGTTCACGTGATGAAGCTGATATCCGTGTTCATGAGTTTTTTAAGACACCATATTTCAAGTCAGGGATCTACCCTCTTCCAGGTTCTCAGACGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAGTTGTAACCTCACGGCAGAATGTAATTAAGGATCACACAATCGAGTGGTTAGAGAAGAATTTTCCAGGGCTTTTTCATGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGGGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCTTTAAATGCCAAGGTTCTTATTGATGATAACCCCCGATATGCCATGGAGTGTGCTGAAGTTGGAATTAGAGTCCTACTTTTTGATTATGAAAACTCATATCCTTGGTGCAAGAACGAGTCTGTTGATCAGCACCCTCTGGTGACCAGAGTTAAGAACTGGGAAGAAGTGGAACAACAATTAATGTCATTGATAGCTTCGTAG 1107 0.4065 MFRLKNCEGPVRFLYQQTRQHPHRNNLMAYLVGYDPCSHLSKAFSHYPSLSSSARGSCLSFPFLQNLVYANVFGVSRSIGFGPRGCSNDTSGSCSSYSDRILVRAKARPRGFVSNRRQQMLADLEQGNSVRSDECDANLVKVDNGSINGSPAKPPCFSDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGIYPLPGSQTALQKLSRFCSLSVVTSRQNVIKDHTIEWLEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAMECAEVGIRVLLFDYENSYPWCKNESVDQHPLVTRVKNWEEVEQQLMSLIAS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02593 368 SUPERFAMILY HAD-like 159 363 IPR036412 -
Cca11g02593 368 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 166 362 IPR010708 GO:0008253|GO:0009264
Cca11g02593 368 Gene3D - 200 365 IPR023214 -
Cca11g02593 368 PANTHER NUCLEOTIDASE YQFW-RELATED 73 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02593 Cca-Chr11 53198779 53203323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02593 - - gmx:100793947 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02593 11 53198779 53203323 Cca11g02593 11 53198779 53203323 ECH
Cca11g02593 11 53198779 53203323 Cca08g01314 08 39520221 39525773 PCT