Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02583 ATGGCATCGTCAGAGAATGAAACTTGTCACTCTCCTCCTGCCTCTGACCAAACCCCTTCTCCCCATGTCTGTATGCAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATATTGGAGAGTACTAAAGATTGACCGTCTAGATCCTTCTGAACTAAATTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTCTGAGACGGATACATGAGGGTAACAAGTCCACAGGTGGACTAAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTTATCAAATTTCTGGGGCCGTACTACATGCTGCTTATCACAAAAAGGAGGCAAATTGGTGCAATATGTGGCCATACAGTATATGCTGTCTCAAAGAGTGAGATGATTCCACTGCCAAACTCTTCGGTTCGGTCTAACATCAATTCTAAAAATGAAAACAGGTACAAGAGACTCCTATGCATGGTCGACCTAACAAAGGACTTCTTTTTCAGCTACTCATACCACATTATGCGTAGTCTTCAACGGAACATGTGTGATAATGAGACAGGTCATGTTCTTTATGAGACCATGTTTGTTTGGAATGAGTTCTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATATGGACAGTTGCACTAGTGTATGGCTTTTTTAAACAGGAAACACTTATGATATCTGGACAGGAGTTGATACTTACACTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAAGGAAGAGTAGCAAATGATGTTGAGACAGAACAAATAGTCTTTGAGGATGTTTCAGAAGGTCTTCCCATCCAAATTAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAGAAGGATCAGAATTATCAAGCTACTAGACTTCACTTTGAAAACCTTGTCAAAAGATATGGGAATCCTATCATTATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGTGAGTCCATACTTCGTGCAGAGTTTGCTAATGCCATAGATTTCATTAATAAAGATTTATCTGAGGAGAACAGACTTAGGTTCCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAATCTGCAAATGTCTTGCAGCTTCTTGGCAAAGTGGCTGCATATGCATTGACATTAACAGGTTTTTTCTATTGCCAAGCAACACCAACCTTGACACCAGAAGAATGTCTAAAATGGCCAACTACAGACAATGCTGATAAGGGAACCTTTTCACCTACTAGACAAGTCAATGATGACAATGAGGATGCTAATAATTTAGAGAGGAAACCCAGTGAAGGAGACAATGATGCTAATGAAAGTCATTCTGTCAAACCTCCCAAGTTGCAGAGGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACAAATGTTGCTCAATATGCATATGGGTTGGCTGCTCTTGGTCATCAGCTCCACGCTCTGGGAGTTATTGATCACCCAAAAATTGATCTTGATGATCCCGTAGCTGATGATTTAATGAGGTTTTATGAGCGGATGGGTGATACACTTGCTCATCAGTATGGTGGTTCTGCTGCACACAACAAGATTTTCTCCGAGAGGAGGGGCCAGTGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTACAGCAATGCATACATGGATGCTGTGAAACAGGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAGCAGGGTAAGCCCGCTCTGTGGGAGTTGGGTTCAGATCAGCTCTTTGATACAGGAAGACATGGAGATGACGATGCAAGGTCACTTTTCAAAAGATCCTTCTCAGATGGAAACATTCTTAATGATAGTTCTACACCAATGTCAGCCCCAAAGGCCAGGCACGAAAAATTCCCAAGCCAAGGCTTACCAGACCGATCAGGAGAAGGAAACAAGGGTCTTTGTGAGTCATCACCAGAAATATCAACTACTGAGAGTGACATCTCATTTTCAAGGTACACTCCCCCAATGCCTCGGAGACAGCTCTTTGGTGATATACAAAGGGAGCGCGGCATTGAAAGTGAACATATTTACTATTCTGATCACGGGGATTCCTTCAGCTGCTCCAACTTTGTTGACCTGGATTGGCTATCTTCTTCAGGAAATTCATGCGAAGAAGAGCCATTCGAGAGGTCATCAATCACCAACTCTCCAATTGCCGGAGTTTCTTCAGAAAATGTTGTCAATGGAATAATAGTAGGAGAAACAACTGCCTCCACTAGTGATTTGGGGGGTTCCAGCCTGAAGGGAAGGGAGCAAACTGAATCCGAGTTATCCTATGGTGATGCGCGGTCCAATGCATCAGAGGATTTTCCAGATACTTTTGTACAGTGGGTGACTTATGGGCAGACACTTTGCCATTGA 2511 0.4233 MASSENETCHSPPASDQTPSPHVCMQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLPNSSVRSNINSKNENRYKRLLCMVDLTKDFFFSYSYHIMRSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQETLMISGQELILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVSEGLPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRAEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKSANVLQLLGKVAAYALTLTGFFYCQATPTLTPEECLKWPTTDNADKGTFSPTRQVNDDNEDANNLERKPSEGDNDANESHSVKPPKLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGVIDHPKIDLDDPVADDLMRFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAVKQDAINVFLGHFQPQQGKPALWELGSDQLFDTGRHGDDDARSLFKRSFSDGNILNDSSTPMSAPKARHEKFPSQGLPDRSGEGNKGLCESSPEISTTESDISFSRYTPPMPRRQLFGDIQRERGIESEHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEEEPFERSSITNSPIAGVSSENVVNGIIVGETTASTSDLGGSSLKGREQTESELSYGDARSNASEDFPDTFVQWVTYGQTLCH 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02583 836 MobiDBLite consensus disorder prediction 440 484 - -
Cca11g02583 836 MobiDBLite consensus disorder prediction 685 700 - -
Cca11g02583 836 MobiDBLite consensus disorder prediction 788 817 - -
Cca11g02583 836 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 10 836 IPR043573 GO:0043813|GO:0046856
Cca11g02583 836 MobiDBLite consensus disorder prediction 788 812 - -
Cca11g02583 836 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 10 836 - -
Cca11g02583 836 ProSiteProfiles Sac phosphatase domain profile. 163 556 IPR002013 GO:0016791
Cca11g02583 836 MobiDBLite consensus disorder prediction 442 457 - -
Cca11g02583 836 MobiDBLite consensus disorder prediction 1 21 - -
Cca11g02583 836 Coils Coil 836 836 - -
Cca11g02583 836 MobiDBLite consensus disorder prediction 458 481 - -
Cca11g02583 836 Pfam SacI homology domain 100 396 IPR002013 GO:0016791
Cca11g02583 836 MobiDBLite consensus disorder prediction 650 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02583 Cca-Chr11 53059280 53071395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02583 25 836 Acyl Lipid Metabolism Gene Families AT3G43220 64.540 0.0 1034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02583 K22913 - gmx:100810079 1583.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02583 11 53059280 53071395 Cca11g02583 11 53059280 53071395 ECH
Cca11g02583 11 53059280 53071395 Cca08g01332 08 40084062 40106919 PCT