Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01332 ATGGCGTCGTCGGAGAATGAACCTTCTTCTCACTCTCCTCCTCCTGCACATGCGTGTATGCACAAGTTCAGGCTCTATCAGACTCTTTCGAAATTTTACATGATAGGAAGGGACAAGAGCAGGACTCATTGGAGAGTGTTAAAGATTGAGCGACTAGATCCCTCCGAGCTGAATGTGCTTGAAGATTCCACCACATACACAGAAAGGGAATGTTCTGACCTGTTGAGGCGTATACACGAGGGAAACAGGTCCACAGGTGGACTGAAATTTCTTACAACTTGTTATGGAATTGTTGGGTTCATAAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGAAAATTGGTGCAATCTGTGGTCATACAGTATATGGTGTCTCAAAGTGTGAGATGGTTCCACTGCAAAATTCTTCTGTCCATTCTAACATCATCGATTCTAAAAATGAAAACAGATACAAGAGGCTCCTATGCATGGTCGACCTTACAAAGGATTTCTTTTTCAGCTACTCATACCATATTATGCGCAGTCTTCAAAAGAATTTGTGTGATAGTGAAACTGGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTTTTGACTCGAGGAATTAGGAATCACCTGCAGAGTACTATTTGGACAGTTGCACTGGTGTACGGCTTTTTCAAACAGGAAACACTTTCAATATCTGGGCGGGAGTTTATACTTACACTCATTGCAAGACGGTCTCGCCATTTTGCTGGCACTAGGTATCTGAGACGAGGTGTAAATGAGAAGGGTAGAGTAGCTAATGATGTCGAGACAGAACAAATTGTATTTGAGGATGTTCCCGAAGGTCTTCCAGTCCAAATATGCTCTGTTGTCCAGAATCGGGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCACGTCTAAATCTTAAGCCCGATATTATATTGTCAAAGAAAGATCAGAACTATCAAGCCACTAGACTTCACTTTGAAAATCTTGCCAAAAGATATGGGAATCCAATAATAATCTTGAATTTGATAAAGTCATATGAGAGGAAGCCTCGAGAGTCCATACTTCGTTCTGAGTTTGGTAATGCTATTGATTTCATTAACAAAGATTCATCAGAGGAGAGCAGGCTGAGGTTTCTTCATTGGGATCTAAAACATTTTCAGAGCAAAGCTACAAATGTTCTGCTACTTCTGGGAAAGGTTGCTGCATATGCTTTGACATTAACAGGTTTTTTATATTGCCAAGTGTCGCCATCTCCTAGATCTGAAGACTCTATAAAATGGCCATCTATTAATTTTGCTTACGGCAATATTGATAAGGGAAGCTTTCAACCCACAAGACATGTTGATCCTGAGAATGAAGATGCTAATAATTTAGAGAGGAAACCTAGTGGAGAAAACAACCTTGCTAATGGAGACCATTTTGTCAAGCCGCCCATGTTCCAGAGGGGGGTTCTCAGAACCAATTGTATAGACTGCTTAGATCGCACAAATGTTGCACAATATGCATATGGATTGGCTGCTCTCGGCCACCAGCTTCATGCTCTGGGGATTATTGAACACCTGAAAATTGACCTCGATGATCCTCTTAGTGATGATTTGATGGGATTTTATGAGCGGATGGGTGACACACTTGCACACCAGTATGGTGGTTCTGCTGCACACAACAAGATATTCTCCGAGAGGAGGGGACAATGGAAAGCTGCAACACAATCCCAGGAGTTTTTTAGGACTCTTCAACGCTATTACAGCAATGCTTATATGGATGCTGAGAAGCAAAATGCAATTAACTTATTCCTGGGGCATTTTCAGCCACAACTGGGTAAGCCTGCTCTATGGGATTTGGGCTCAGATCAGCATTATGGTATAGGGAGACATGGAGATGATGATGCAAGGTCATTTGTGAAAAGATGTTTCTCAGATGGAAGTATCATTCATGACAATTCTACACCTATGTCAGCCCCAAATCCAAACCTTGAAAATTTCTCAAAGCTAGGTTTGCAGGACCAATCAGAGGAAGGAAGCAAGGCCTTTTGTGACTCATCGCCTGTATCCACTTCCGAGAGTGAAATGTCATATTCAAGGTACACTCCCTCAATACCTCAGAGACAACTTTTGGGAGACGCACAAAGAGAGCGCTTCCTAGATAGTGACCATAATTCCTTTTCTGCACATGGGGATTCATTCAGCTGTTCCAACTTTGTTGACCTGGATTGGCTGTCTTCTTCCGGAAATTCATTTGAAGAAGATCCATTCGAGAGGTTATCAATTACCAACTCTTCGATTGCTGGGCTTTCTTCAGAAAATGTTATTAATGGAGTTATTATGGGAGGAGATACTCCCTCCACAAGTGATTTGGACTCAAGCATCAAGTTAAGACTTGGGATGGGATATGGCTCCGACACAGTCATTTAA 2427 0.419 MASSENEPSSHSPPPAHACMHKFRLYQTLSKFYMIGRDKSRTHWRVLKIERLDPSELNVLEDSTTYTERECSDLLRRIHEGNRSTGGLKFLTTCYGIVGFIKFLGPYYMLLITKRRKIGAICGHTVYGVSKCEMVPLQNSSVHSNIIDSKNENRYKRLLCMVDLTKDFFFSYSYHIMRSLQKNLCDSETGHVLYETMFVWNEFLTRGIRNHLQSTIWTVALVYGFFKQETLSISGREFILTLIARRSRHFAGTRYLRRGVNEKGRVANDVETEQIVFEDVPEGLPVQICSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDQNYQATRLHFENLAKRYGNPIIILNLIKSYERKPRESILRSEFGNAIDFINKDSSEESRLRFLHWDLKHFQSKATNVLLLLGKVAAYALTLTGFLYCQVSPSPRSEDSIKWPSINFAYGNIDKGSFQPTRHVDPENEDANNLERKPSGENNLANGDHFVKPPMFQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIEHLKIDLDDPLSDDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWKAATQSQEFFRTLQRYYSNAYMDAEKQNAINLFLGHFQPQLGKPALWDLGSDQHYGIGRHGDDDARSFVKRCFSDGSIIHDNSTPMSAPNPNLENFSKLGLQDQSEEGSKAFCDSSPVSTSESEMSYSRYTPSIPQRQLLGDAQRERFLDSDHNSFSAHGDSFSCSNFVDLDWLSSSGNSFEEDPFERLSITNSSIAGLSSENVINGVIMGGDTPSTSDLDSSIKLRLGMGYGSDTVI 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01332 808 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 795 IPR043573 GO:0043813|GO:0046856
Cca08g01332 808 MobiDBLite consensus disorder prediction 446 477 - -
Cca08g01332 808 MobiDBLite consensus disorder prediction 449 465 - -
Cca08g01332 808 ProSiteProfiles Sac phosphatase domain profile. 159 555 IPR002013 GO:0016791
Cca08g01332 808 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 1 795 - -
Cca08g01332 808 MobiDBLite consensus disorder prediction 678 699 - -
Cca08g01332 808 Pfam SacI homology domain 95 390 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01332 Cca-Chr8 40084062 40106919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01332 20 778 Acyl Lipid Metabolism Gene Families AT3G43220 62.992 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01332 K22913 - gmx:100786438 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01332 08 40084062 40106919 Cca08g01332 08 40084062 40106919 ECH
Cca11g02583 11 53059280 53071395 Cca08g01332 08 40084062 40106919 PCT