Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02535 ATGGCGATATTCTCCGAACCGAATCACACTTCCGATGGGGTCTCGCAGCGAGTCAACAGTCCTCGTTTTTCGGGTCCCATGACTCGCCGCGCCCACTCCTTCAAACGCGGCGGCGGCGGCGAGGTGGAGCTCCAAATCAGCTCGCCCAGATCGGAGGAGGCGTCGGAGGGTGTTCCGGCGAAGCACAGTCACCATCACGTGACCCAGAGAGTGCACGTGAAGGGGTTGTTGCTGAAGAAGCCCCTTGCTTCCATCGTTGAGGATTTGGGGCTGAGGGAAAGGAAGAAAATTGGGCATTGGATGTTCTTGGTTTTCTGTGGGGTGTGCTTCTTCATGGGTGTTCTCAAAATATGTGCCACTGGATGGCTTCGATCTGCTGTTGAAAGAACTCAATCCAATAAGGAACTATCCGACTCCATTGCTAGTCTAAATCTAATGGACCAACGCTCCCTTGGTTATGCATATAGGGAGGGAGCAAGTGATGTTGAACGAACATTAAAAACAGTAGCAACAGGAGTAGATGGCAGCCATGCTGCCAAGACTGAAGATTCAGTGGTCTGGTCAAAACCCAACAGTGACAATTTCACCCAGTGTATAGATCTGCCAAGTAATCATAAAAAGCTAGATGCAAAGACTAATGGCTACATTCTTGTAAATGCAAATGGTGGCCTGAATCAGATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACGCTAGTTCTTCCTTCTCTTGATCATTCCTCCTACTGGGCTGATGACAGTGGCTTCAAGGATTTGTTTGATTGGAAGCATTTTATTGATATGCTGAAGGATGATGTCCACATAGTTGAGAAATTACCTCCTGCCTATGCTGGAATTGAGCCTTTCTCAAAAACTCCAATTTCTTGGTCCAAGGTTACTTATTATAAGACTGAGGTTCTTCCCCTCCTAAATCAGCACAAAGTGATCTATTTCACTCATACCGATTCCAGGCTTGCTAACAACGGCATTCCAAGTTCCATACAGAAACTAAGATGCCGTGTAAATTACAGGGCATTGAAATATTCTGCTCCAATTGAAGAATTTGGAAATACATTGGTATCTAGAATGCAACAGAATGGAAATCCTTATCTTGCCCTTCATCTGAGATATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCACAATTTGACTGCAGAAGAAGATGAAGAACTGAGACAGATGCGATATGAAGTCAGTCACTGGAAGGAGAAGGAGATTAACGGGACTGAGAGGAGATTGCTTGGAGGTTGTCCCTTAACTCCCAGGGAAACTTCCTTATTACTTAGAGCATTGGGTTTTCCCTCACACACAAGAATTTATCTAGTAGCTGGAGAAGCATACGGAAAAGGAAGTATGAAATATCTTGAGGACGATTTCCCAAATATTTTCTCTCATTCATCTCTGTCCTCTGAAGAAGAATTGAGTCCTTTCAAGAATCATCAGAACATGTTGGCTGGAATAGACTATGTTGTTGCCCTTAAGAGTGATGTATTTCTTTACACTTATGATGGAAATATGGCAAAAGCCGTACAAGGTCATAGGCGCTTTGAAAACTTTCAGAAAACCATCAATCCAGACAAGATGAATTTTGTTAAACTTGTTGATCAGTTGGATGAAGGAAAAATTTCATGGAAAAAGTTCAGCTCCAAGGTAAAAAAGCTGCATGGAGACCGAATTGGTGCTCCATATCCAAGGGAGCCTGGAGAATTTCCAAAGCTGGAGGAAAGTTTTTATGCAAATCCTCTTCCAGGATGTATTTGTGAAACAAGATAG 1815 0.4358 MAIFSEPNHTSDGVSQRVNSPRFSGPMTRRAHSFKRGGGGEVELQISSPRSEEASEGVPAKHSHHHVTQRVHVKGLLLKKPLASIVEDLGLRERKKIGHWMFLVFCGVCFFMGVLKICATGWLRSAVERTQSNKELSDSIASLNLMDQRSLGYAYREGASDVERTLKTVATGVDGSHAAKTEDSVVWSKPNSDNFTQCIDLPSNHKKLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHSSYWADDSGFKDLFDWKHFIDMLKDDVHIVEKLPPAYAGIEPFSKTPISWSKVTYYKTEVLPLLNQHKVIYFTHTDSRLANNGIPSSIQKLRCRVNYRALKYSAPIEEFGNTLVSRMQQNGNPYLALHLRYEKDMLAFTGCSHNLTAEEDEELRQMRYEVSHWKEKEINGTERRLLGGCPLTPRETSLLLRALGFPSHTRIYLVAGEAYGKGSMKYLEDDFPNIFSHSSLSSEEELSPFKNHQNMLAGIDYVVALKSDVFLYTYDGNMAKAVQGHRRFENFQKTINPDKMNFVKLVDQLDEGKISWKKFSSKVKKLHGDRIGAPYPREPGEFPKLEESFYANPLPGCICETR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02535 604 MobiDBLite consensus disorder prediction 8 23 - -
Cca11g02535 604 PANTHER O-FUCOSYLTRANSFERASE 28 97 603 - -
Cca11g02535 604 CDD O-FucT_plant 215 536 IPR024709 -
Cca11g02535 604 PANTHER OS02G0726500 PROTEIN-RELATED 97 603 - -
Cca11g02535 604 Pfam GDP-fucose protein O-fucosyltransferase 215 530 IPR019378 -
Cca11g02535 604 MobiDBLite consensus disorder prediction 1 65 - -
Cca11g02535 604 PIRSF UCP009360 62 604 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02535 Cca-Chr11 52495023 52499635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02535 143 601 Miscellaneous Gene Families AT2G37980 62.687 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02535 - - gmx:100801100 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02535 11 52495023 52499635 Cca11g02535 11 52495023 52499635 ECH
Cca11g02535 11 52495023 52499635 Cca08g01385 08 41510963 41515898 PCT