Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01385 ATGGCGCGCAGTAGCATGAACACCAGCGTGGATGGCGTTCCTCACCGAGTCAACAGCCCGCGTTACAGCGGGTCCATGACTCGGCGAGCCCACTCGTTCAAACGCGGCACCAACAACAATGAGGTTCAGCTCCAAATCAACTCCCCCAGATCCCCTTTGGAGAAAAGGAACAAACTTGGGCACTGGGTGTTCTTGCTCTTCTGTGGGGTGTGCTTCTTTCTGGCTCTGCTCAAGATTTCTACCACTGCCTGGTGGTTCCGATCACATCCATCTATTCAGGAACTATCTGACTCCATTGATAGTCAAAGTGTAATGGATCAAAGCTCCCATGGTTATGCAGATAGGGAGGGAGGCAGTGAGGTTGAACGGACTCTAAAGATGGTAACTACAGGAGTGATTGATAGCCAAGCTGGCATGGTTGAAGAGTCAGGTATCTGGTCTAAACCCCACTATGAGAATTTCACACAGTGTATAGACCTGCCAAGAAATCATAAAAAGCTAGATGCAAAGACCAATGGCTATATTCTTGTAAATGCTAATGGTGGTCTGAATCAAATGAGATTTGGGATATGTGATATGGTTGCTGTTGCTAAGATTATGAAGGCAACACTTGTTCTTCCTTCTCTCGATCACACCTCTTACTGGGGTGATGCAAGTGGCTTCAAGGATTTGTTTGACTGGAAACATTTTATTGGGATGCTGAAGGATGATATCCACATAGTTGAGACATTACCACCTGCCTATGCTGAAATTGAACCTTTCTCAAAACCTCCAATATCTTGGTCTAAGGCCAGTTATTACAAGACTGAGGTTCTTCCCCTCCTAAAGCACCACAAAGTGATCTATTTCACCCATACTGATTCCAGACTTGCTAATAATGGAATTTCAAGTTCCATACAAAAACTAAGATGTCGTGTAAATTATAGAGCATTGAAATATTCAGCTCCAATTGAAGAATTTGGAAACAAATTAGTATCTAGAATGCGACAGAATGAAAATCCTTATCTTGCACTTCATTTGAGGCAAAAGGATATGCTTGCATTTACTGGCTGCAGCCACAATTTGACTGCAGAAGAAGATGAAGAACTACGAAACATGCGGTATGAAGTTGGCCACTGGAAGGAGAAAGAGATTAATGGGACTGAGAGGAGATTGATGGGAGGTTGTCCATTAACTCCTAGGGAAACTGCCCTATTGCTTAACGCACTTGGTTTTCCATCACAAACCAGGATTTATCTGGTAGCTGGAGAAGCATATGGAAGAGGAAGTATGAAATATCTTGAGGATCATTTCCCCAACATTTTCTCTCATTCCTCTCTGTCTTCCAAAGAAGAGTTGGATCCTTTCAAGAATCACCAGAACATGTTAGCCGGTATAGACTATATTGTTGCACTTCAGAGTGATATATTTCTCTATACTTATGATGGAAACATGGCAAAGGCAGTACAAGGCCATAGGCGCTTCGAAAACTTCAAAAAGACCATCAACCCAGACAAGGTAAATTTTGTTAAACTCGTGGATAAGTTGGATGAAGGAAAAGTTTCTTGGGAGAATTTCAGCTCCAAGGTGAAAAGGCTTCATGAAGACCGAATCGGTGCTCCGTATCCTAGGGAGCGTGGAGAATTTCCTAAGCTAGAGGAAAGTTTTTATGCAAATCCTCTGCCAGGATGGTTGCTGTGCTATGTTATTTTCAATACTTCTGTCTTGAGAAGGGCACAGGAAAAGGCTAGGAACGGAGCTACTCCGCAGCATTTCAAATTAAAGGATCAAGCATGCGCAGGCCAAGTATACCGTATACCATTCACTACACACGATAAACATTAA 1824 0.4298 MARSSMNTSVDGVPHRVNSPRYSGSMTRRAHSFKRGTNNNEVQLQINSPRSPLEKRNKLGHWVFLLFCGVCFFLALLKISTTAWWFRSHPSIQELSDSIDSQSVMDQSSHGYADREGGSEVERTLKMVTTGVIDSQAGMVEESGIWSKPHYENFTQCIDLPRNHKKLDAKTNGYILVNANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHTSYWGDASGFKDLFDWKHFIGMLKDDIHIVETLPPAYAEIEPFSKPPISWSKASYYKTEVLPLLKHHKVIYFTHTDSRLANNGISSSIQKLRCRVNYRALKYSAPIEEFGNKLVSRMRQNENPYLALHLRQKDMLAFTGCSHNLTAEEDEELRNMRYEVGHWKEKEINGTERRLMGGCPLTPRETALLLNALGFPSQTRIYLVAGEAYGRGSMKYLEDHFPNIFSHSSLSSKEELDPFKNHQNMLAGIDYIVALQSDIFLYTYDGNMAKAVQGHRRFENFKKTINPDKVNFVKLVDKLDEGKVSWENFSSKVKRLHEDRIGAPYPRERGEFPKLEESFYANPLPGWLLCYVIFNTSVLRRAQEKARNGATPQHFKLKDQACAGQVYRIPFTTHDKH 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01385 607 MobiDBLite consensus disorder prediction 1 41 - -
Cca08g01385 607 PANTHER OS02G0726500 PROTEIN-RELATED 56 558 - -
Cca08g01385 607 CDD O-FucT_plant 174 494 IPR024709 -
Cca08g01385 607 PIRSF UCP009360 23 554 IPR024709 -
Cca08g01385 607 Pfam GDP-fucose protein O-fucosyltransferase 174 488 IPR019378 -
Cca08g01385 607 PANTHER O-FUCOSYLTRANSFERASE 28 56 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01385 Cca-Chr8 41510963 41515898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01385 145 555 Miscellaneous Gene Families AT2G37980 67.476 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01385 - - gmx:100807090 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01385 08 41510963 41515898 Cca08g01385 08 41510963 41515898 ECH
Cca11g02535 11 52495023 52499635 Cca08g01385 08 41510963 41515898 PCT