Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02522 ATGGAGGGTGACACATTCTCTGGCCTGGGCAACGGTACCCAGATTGATAGCAAGATCTTGCAGACATTTCAGAAAAGCTTTGTTCAAGTCCAAAACATCTTGGATCAGAACCGGGTACTCATCAATGAGATAAACCAGAATCATGAGTCCAAGGTTCCTGACAACCTCAGCAGAAACGTTGGACTCATTAGGGAGCTCAACAACAACATCAGAAGAGTGGTTGACCTATATGCGGATCTTTCAAGTTCTTTTACCAAATCCATGGAAGTTTCTTCAGAAGGGGATTCTAGTGGTGCTGTGAAATCTGATGGCAAAGCTGGCCACAAGCGACACAGGCCTCTTTAG 345 0.4522 MEGDTFSGLGNGTQIDSKILQTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLSRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGAVKSDGKAGHKRHRPL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02522 114 PANTHER PROTEIN ELF4-LIKE 3 1 113 - -
Cca11g02522 114 MobiDBLite consensus disorder prediction 87 114 - -
Cca11g02522 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Cca11g02522 114 PANTHER PROTEIN ELF4-LIKE 4 1 113 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02522 Cca-Chr11 52340682 52341585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02522 - - ccaj:109808760 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02522 11 52340682 52341585 Cca11g02522 11 52340682 52341585 ECH
Cca11g02522 11 52340682 52341585 Cca08g01395 08 41735451 41735786 PCT