Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02520 ATGGCTTCAACTTCGGCAGTTTCAATGGCTGTGCCACTATCTTATGCCAGCCAGAAGAGGGTGGTGCCCAGCTCTGAGGCGTTCTTTAAGGCACCGTTGCCTCTGAGGCCATCAAAGGCTGTGGCAACATCAAAAGCCAATGGAAGGCTTCAAGTGAGGGCATCCATGAAAGAGAAATTTGTGACGGGTTTGACAGCAGCTGCATTGACAGCTTCAATGATGGTTCCAGATGTGGCTGAAGCTGCCGTTACACCTTCTCTCAAGAACTTCTTGCTCAGCATTGCGGCTGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCAGCATGGCGGCTGGTGGAGTTGTGGCTGCAGCAATTGTTGGTGCCGTGATTGGTGTTTCCAATTTCGATCCAGTCAAACGAAGCTAAGAAAATTCTGA 480 0.425 MASTSAVSMAVPLSYASQKRVVPSSEAFFKAPLPLRPSKAVATSKANGRLQVRASMKEKFVTGLTAAALTASMMVPDVAEAAVTPSLKNFLLSIAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQHGGWWSCGCSNCWCRDWCFQFRSSQTKLRKF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02520 159 Coils Coil 127 128 - -
Cca11g02520 159 PANTHER OS07G0673550 PROTEIN 1 99 - -
Cca11g02520 159 PANTHER EXPRESSED PROTEIN 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02520 Cca-Chr11 52332612 52333091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02520 - - gmx:100306291 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02520 11 52332612 52333091 Cca11g02520 11 52332612 52333091 ECH
Cca11g02520 11 52332612 52333091 Cca08g01403 08 41950982 41951656 PCT