Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02509 ATGTCTGACACTGAAGACCATGCAGCACACTATTCCAATAAACAGAGGTTCAGGGACAGATCTAAGGAGATGCTTTCCAAACAGGCCGTTAAGATTGCCAAACAAGCTGAAGAGCACGAAAGGTTCATCAACAAGGTGACGCATCTCGTTGGGGTCCTTGGTTTTGGTGGCTTTTGCTTTCTTTTAGGGGCAAGACCGCAAGACATCCCCTATGTATATTGTTTGTTCTTCGTCATCTTTGTTCCTCTTCGTTGGATATACTATAGGTTCAAGAAATGGCACTATTATCTACTGGATTTTTGCTATTATGCCAATACAATATTCTTGGTTGATCTTCTTTTTTATCCATCAAACGAGAAACTTTTCATGGTTTGCTTTTCTTTTGCGGAGGGGCCATTAGCATGGGCTTTGATTGTTTGGCGCTGCAGCTTGGTTTTCAGTTCTCTTGACAAAATTGTCAGTGTTCTTATCCATCTTTTACCTGGATTGGTTTTCTTTACTATTCGATGGTGGAATCCTGCAACCTTTGAAGCCATGCATCCAGAGGGAACTGCTCGAAGGCCTACATGGCCTTATGTCGAAGATAAATCCTTTCTCTGGACATGGCTGTTTCTGGTTCCCTTGGTAGCTTACACCTTGTGGCAGCTTCTATACTTCCTCATTGTCAACGTCTTACGCAGACAAAGGCTTTTAAGAGATCCTGAAGTTATGACTTCCTACAGGGAACTCTCGAAAAAGGCTCAGAAAGCAAACAACATATGGTGGCGCTTAAGTGGGTTGCTTGGGGATCAAAATCGCATGCTAATGTACATTTTTCTTCAAGGCTTATTTACTGTGGCAACCATGGCACTTACTGTCCCCATATTCTTGTCATATGAATTGCATGTAGTTTTTCAAATACTCAAGGTTTCAGCCTCAGTATGGAACGGAGGAAGTTTTCTGTTAGAAGTAATGCCTAGGCAGGCAATTCTCAAGGAGAAAATGAAATCAGAGGTGCAACCTCAATCCATTGATCAATAG 1020 0.4206 MSDTEDHAAHYSNKQRFRDRSKEMLSKQAVKIAKQAEEHERFINKVTHLVGVLGFGGFCFLLGARPQDIPYVYCLFFVIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLFYPSNEKLFMVCFSFAEGPLAWALIVWRCSLVFSSLDKIVSVLIHLLPGLVFFTIRWWNPATFEAMHPEGTARRPTWPYVEDKSFLWTWLFLVPLVAYTLWQLLYFLIVNVLRRQRLLRDPEVMTSYRELSKKAQKANNIWWRLSGLLGDQNRMLMYIFLQGLFTVATMALTVPIFLSYELHVVFQILKVSASVWNGGSFLLEVMPRQAILKEKMKSEVQPQSIDQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02509 339 PANTHER OS01G0585100 PROTEIN 17 333 IPR021261 -
Cca11g02509 339 MobiDBLite consensus disorder prediction 1 20 - -
Cca11g02509 339 Pfam Protein of unknown function (DUF2838) 45 154 IPR021261 -
Cca11g02509 339 PANTHER - 17 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02509 Cca-Chr11 52252282 52256799 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02509 - - gmx:100791853 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02509 11 52252282 52256799 Cca11g02509 11 52252282 52256799 ECH
Cca11g02509 11 52252282 52256799 Cca08g01413 08 42228724 42233078 PCT