Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01413 ATGTCTGACAATGAAGATCATGAAGACTTCACATATATCAAATCCTCTACAAAGACCAAGCATAGGTTAAGGGATAGGTCCAAGGAGGTACTGTCCAAACAAGCCGTTAAGATAGCCAAACAAGCTGAAGAGCATGAAAGGTTCATCAACAAGGTGACTCATCTTTTGGGGGTTCTTGGCTTTGGTGGGTTTTTCTTCCTCTTAGGGGCAAGGCCACAAGACATCCCCTTAGTATATTGTGTGTTCTACGTGGTCTTTGTTCCTCTCCGTTGGATATATTATAGGTTCAAGAAATGGCATTACTATCTCCTGGATTTTTGCTATTATGCCAATACAATCTTCTTGGTTTACCTTCTTTTTTATCCAAGGAATGAAAAGCTTTTCCTGGTTTGCTTTTCCTTTGCTGAGGGTCCATTAGCGTGGGCTTTGATTGTTTGGCGTTGCAGCTTGGTTTTCAGTTCAGTTGACAAAATTGTCAGTGTTCTTATCCATCTTTTACCTGGATTGGTTTTCTTTACAATTCGATGGTGGAATCCTGCAACCTTTGAAGCCATGCGACCAGAGGGAACTGCTGGAAAAGCTACATGGCCTTATATTGAAGATAAATCCTATCTATGGATGTGGCTGTTTCTGGTTCCTTTAGCAGCTTACACTTTGTGGCAGGTTCTGTACTTCCTCATTGTCAACGTCTTGCGTCGACAACGATTTTTAAGAGATCCTGAAGTCATGACTTCCTACAGGGAACTCTCTAAAAAAGCTCAGAAAGCAAACAATGTGTGGTGGCGCTTAAGTGGCATACTTGGGGATCAGAATCGCTTGTTAATGTACATTGTTCTTCAAGGCATATTTACTTTGGCAACCACAGCACTGACTGTTCCAATATTCTTGTCTTATGAGTTGTCTGTAGTTTTCCAAATACTGAAGATTTCTGCATCAGTGTGGAATGGGGGAAGCTTTCTAATAGATGTAATGCCCAGGCAGGTAATTCTCAAGGAGAAAAAGAAATCAGAGGTAAAGCCTGCTTAA 1026 0.4123 MSDNEDHEDFTYIKSSTKTKHRLRDRSKEVLSKQAVKIAKQAEEHERFINKVTHLLGVLGFGGFFFLLGARPQDIPLVYCVFYVVFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVYLLFYPRNEKLFLVCFSFAEGPLAWALIVWRCSLVFSSVDKIVSVLIHLLPGLVFFTIRWWNPATFEAMRPEGTAGKATWPYIEDKSYLWMWLFLVPLAAYTLWQVLYFLIVNVLRRQRFLRDPEVMTSYRELSKKAQKANNVWWRLSGILGDQNRLLMYIVLQGIFTLATTALTVPIFLSYELSVVFQILKISASVWNGGSFLIDVMPRQVILKEKKKSEVKPA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01413 341 Pfam Protein of unknown function (DUF2838) 51 160 IPR021261 -
Cca08g01413 341 PANTHER - 1 339 - -
Cca08g01413 341 PANTHER OS01G0585100 PROTEIN 1 339 IPR021261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01413 Cca-Chr8 42228724 42233078 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01413 - - gmx:100805362 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01413 08 42228724 42233078 Cca08g01413 08 42228724 42233078 ECH
Cca11g02509 11 52252282 52256799 Cca08g01413 08 42228724 42233078 PCT