Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02503 ATGGATAAAGATGCTAGAGTGGAAGAGACTGTTGATTTGCTAACCAATGCGGAATTGGTGAGATCGGTCTCTGATAAGCATCATGATCTTTTAAGGCCTTCTGCTCGGAACTATACAAGAGGACAAGCGAAAGATGGAAGTGGCCATGGAAAGGGAAAGCATGCCTTACTCAGAGACACAGAGGACTTCCAAATGGGAATTTATGATAAGCCCCTTCCGTTTTTTGGATGTGGAGTCGGATGGTTCTCATTTCTTTTTGGATTTCTATGCCCACCAATGTGGTTCTATGCTACAATTCTCTATTTTGGAAATCACTATCGGAAGGATCCGAGGGAGCGAGCAGGGCTGGGAGCCTCTGCCATTGCTGCATTACTGTGCTCTGTAGCGTTGCTGATAATTGCAGTTATTCATTTGTTAAAATTGCGGTCCCACTATTTCTAA 441 0.4399 MDKDARVEETVDLLTNAELVRSVSDKHHDLLRPSARNYTRGQAKDGSGHGKGKHALLRDTEDFQMGIYDKPLPFFGCGVGWFSFLFGFLCPPMWFYATILYFGNHYRKDPRERAGLGASAIAALLCSVALLIIAVIHLLKLRSHYF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02503 146 PANTHER BNAC08G12080D PROTEIN 15 137 - -
Cca11g02503 146 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 15 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02503 Cca-Chr11 52211100 52215427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02503 - - gmx:100795083 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02503 11 52211100 52215427 Cca11g02503 11 52211100 52215427 ECH
Cca11g02503 11 52211100 52215427 Cca08g01415 08 42305128 42310665 PCT