Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01415 ATGGATAAAGGTTGCGGTATGGAAGAGACTGTTGATTTGAGAAATGGTGTGGAATTGGCAACATCAGCATTTGATAAGCATCTTGACCTTCTAAGGCCATCTGCACGAAATTATTCAGTTTTTAGAGGTCAAGCAATAGATGCTGCAGAACATGAAAAGGGCAACTATACACTAATCAGAGATCCAGAGGACTTCCAAACGGGACTTTATGACAAACCTCTTCCATGTTATGGCTGTGGAATTGGATGGTTCTCATTTCTTCTTGGATTTCTATGTCCACCTCTGTGGTACTATGCAACAATGCTCTACTTTGGAAATTATTATAAGAAGGATCCTAGGGAACGAGCAGGATTAGGAGCCTCTGCAATTGCTGCATTAATATGCTCAGTAGCATTGCTGATCGTAGGAACAATTCTTCTGTTACGCTTCCCCTGA 435 0.4138 MDKGCGMEETVDLRNGVELATSAFDKHLDLLRPSARNYSVFRGQAIDAAEHEKGNYTLIRDPEDFQTGLYDKPLPCYGCGIGWFSFLLGFLCPPLWYYATMLYFGNYYKKDPRERAGLGASAIAALICSVALLIVGTILLLRFP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01415 144 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 44 139 - -
Cca08g01415 144 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 44 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01415 Cca-Chr8 42305128 42310665 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01415 - - gmx:100791750 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01415 08 42305128 42310665 Cca08g01415 08 42305128 42310665 ECH
Cca11g02503 11 52211100 52215427 Cca08g01415 08 42305128 42310665 PCT