Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02492 ATGGCGATTGCCGACGActccgctttcagccactcctccctccgccggaggcccaccgccACATCGGACACTTCCGCCGAAGACTTGACCAAGGATTCTGGCTCCGACGACTCCATCAGCAGCGCTGCTAATCCGCAACCGCAGAAAAAGCAACAGCTCGATAGCTCCCTCCTTAAATTCGCCTACCGTCCTTCCGTTCCCGCTCACCGCAGAGTCAAGGAAAGTCCGCTTAGCTCCGACAACATTTTCCGTCAGAGTCACGCGGGCCTCTTCAACCTCTGTATAGTAGTCCTTGTTTCCGTCAATAGTCGACTCATCATCGAGAATTTAATCAAGTATGGCTGGTTGATCAGGTCTGGCTTTTGGTTTAGTTCCAAGTCACTCAGAGACTGGCCACTCTTCATGTGTTGTCTTTCTCTTGTGCTATTTCCCTTTACTGCCTTCATAGTGGAGAAGTTGGCACAACGAAAGTGTATTCCTGAACCAGTTGTTGTTCTACTTCACATAATCATTACTTCAACTTCACTTATCTACCCAATTTTAGTAATTCTCAGGTGTGACTCTGCTTTTCTATCAGGCGTCACATTAATGCTATTTGCTTGCATTGTATGGTTAAAATTGGTGTCTTATGCACATACCAACTATGATATGAGAGCACTTACCAAATCAGTTGAGAAGGGAGAAGCACTACCCAATACTCTGAATATGGACTATCCTTACAATGTGAGCTTCAAGAGCTTGGCATACTTCATGGTTGCCCCTACATTATGTTACCAGCAAAGCTATCCTCGCACACCTTATATTCGAAAGGGTTGGGTGATTCGTCAGCTTGTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATACATCAATCCTATTGTACAAAATTCGCAGCATCCTTTCAAGGGAAACCTGCTCTATGCCATGGAGAGAGTTCTGAAGCTTTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTATTGCTTTTTCCACCTTTGGTTAAATATACTGGCAGAGCTTCTTCGATTTGGTGATCGTGAGTTTTACAAGGATTGGTGGAATGCCAAAACTGTTGAAGAAGTATTGAATTTTTTCACATTGCAGCCTGTTCACAAATGGATGATCCGCCACCTATATTTTCCATGTTTAAGGCATGGCATACCGAAGGCCGTTGCTCTTTTAATTGCCTTCCTGGTTTCTGCTTTGTTCCACGAGCTGTGTATTGCTGTTCCCTGTCACATATTCAAGTTGTGGGCTTTCGGTGGAATTATGTTTCAGGTTCCTTTGGTCTTGATCACTAATTATCTGCAAAATAAATTCAGAAACTCAATGGTGGGAAACATGATTTTTTGGTTCATATTCTGTATTCTTGGTCAACCTATGTGTGTACTGTTATACTACCATGACTTGATGAATAGGAAAAACAAACTTGACTAA 1455 0.4082 MAIADDSAFSHSSLRRRPTATSDTSAEDLTKDSGSDDSISSAANPQPQKKQQLDSSLLKFAYRPSVPAHRRVKESPLSSDNIFRQSHAGLFNLCIVVLVSVNSRLIIENLIKYGWLIRSGFWFSSKSLRDWPLFMCCLSLVLFPFTAFIVEKLAQRKCIPEPVVVLLHIIITSTSLIYPILVILRCDSAFLSGVTLMLFACIVWLKLVSYAHTNYDMRALTKSVEKGEALPNTLNMDYPYNVSFKSLAYFMVAPTLCYQQSYPRTPYIRKGWVIRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPFKGNLLYAMERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEEVLNFFTLQPVHKWMIRHLYFPCLRHGIPKAVALLIAFLVSALFHELCIAVPCHIFKLWAFGGIMFQVPLVLITNYLQNKFRNSMVGNMIFWFIFCILGQPMCVLLYYHDLMNRKNKLD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02492 484 PIRSF Oat_dag 4 484 IPR027251 GO:0004144|GO:0019432
Cca11g02492 484 MobiDBLite consensus disorder prediction 1 52 - -
Cca11g02492 484 PIRSF Oat_ACAT_DAG_ARE 5 484 IPR014371 GO:0008374
Cca11g02492 484 PANTHER STEROL O-ACYLTRANSFERASE 20 484 IPR014371 GO:0008374
Cca11g02492 484 Pfam MBOAT, membrane-bound O-acyltransferase family 213 471 IPR004299 -
Cca11g02492 484 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 1C 20 484 - -
Cca11g02492 484 MobiDBLite consensus disorder prediction 13 28 - -
Cca11g02492 484 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02492 Cca-Chr11 52089628 52096023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02492 20 483 Lipid Metabolism Gene Families AT2G19450 67.423 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02492 K11155 - gmx:548005 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02492 11 52089628 52096023 Cca11g02492 11 52089628 52096023 ECH
Cca11g02492 11 52089628 52096023 Cca08g01428 08 42531067 42542538 PCT