Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02472 ATGGGTGAAAAGAAGCCACGAATTGTGATAATGGGAGCAGGAATGGCAGGCCTTACTGCTGCCAACAAGCTTCACAGTGTGGCTGCCTCAAAAGACTTGTTTGAGGTGTGTGTTGTGGAAGGTGGAAACAGGATTGGTGGAAGAATCAAGACGTCAGAGTTTGGTGGTGACATGATTGAGATGGGTGCTACATGGATCCATGGAATTGAAGGTAGCCCAATTCACAAAATAGCCCAACAAATCCATGCACTTGAGTCTCACAAGCCTTGGGAGTGGATGGATGGGAATGGAAATGAAGCCACCACAATTGCTGAAGATGGCTTTGTGCTAGACCCTTCCTTTCTTCACCCCATCAAGAAGCTTTTCAACAATCTCATTGATCATTTTCAAGGGAACATGTCAACAACAATAACCACCAAAGGTGATTGTGGAAACCTTAGTATTGGCTCTTTTCTTAAACAAGGCCTTGGTGCTTATTGTGGCTCATCAAAAGAGGAAGAGGAGCTCAAAGGGTTTGGAAAATGGAACAAGAAGTTACTCGATGAAGCAATCTTTGCAATGCATGAGAACACACTGAGGACTCATACATCTGCTGCTGACTTGTTCGCTTTGGATTATGGTGCAGAAAGTGAATACCAAGTGTTTCCGGGTGAAGAAATCACAATTGCTAAAGGCTACGTGAGCATAATGGAACATTTAGCATCATTGCTACCACCTGGTTTAGTTCAGTTGGGTAGAAGAGTCACAAGAATTGAATGGCAGCCAGAGGGACACGAGCCTATGAATATGGAAAATGGAACCTGTTCCAGGCCTGTGATGCTACATTTCTGTGATAGCTCTACTATGTCTGCGGATCATGTCATTGTCACAGTTTCACTGGGAGTGTTGAAAGCTGCAATTCGTGGTGATGATTCGGGTATGTTAATGTTCCATCCCCCTTTACCTACTTTCAAGGTTGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGCCCTCAACATGAAAAAAGAGATGAAATTTCCAAAGGGTTCCCCTTTTTGCATATGGTTTTTCATTCACCTCACTCCGAGTTAGGGCACAAGAAAATACCCTGGTGGATGAAAAAGACAGCATCCCTTTGTCCAATCTACAACCATTCTAGTGTCCTCCTAGGTTGGTTTGCTGGGGAAGAAGCACTGGCACTAGAGTCACTCAAAGATGAAGAGATCATTGAAGGGGTTTCAGACACAATTTCATGCTTCCTATCTCATTCACTTGTGTTTTGCAATGGAAATGTGGACTCTCATAAATATGAGGTGAAATTCAGCAAAGTGTTGAAGAGCCAATGGGGAACAGATCCATTGTTTTTAGGGTCATACAGTCATGTGACAGTTGGATCAAGTGGTGATGATTTTGATACAATGGCTGAGCCATTGCCAAAAAGTGGCAGGCGTAGCCACTCTTGTGCTTCACCACAACTTCAAATTTTGTTTGCAGGGGAAGCAACCCACAGGACCTATTATTCCACAACTCATGGAGCTTACTTTAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTATTCATTGTGTTAA 1599 0.4315 MGEKKPRIVIMGAGMAGLTAANKLHSVAASKDLFEVCVVEGGNRIGGRIKTSEFGGDMIEMGATWIHGIEGSPIHKIAQQIHALESHKPWEWMDGNGNEATTIAEDGFVLDPSFLHPIKKLFNNLIDHFQGNMSTTITTKGDCGNLSIGSFLKQGLGAYCGSSKEEEELKGFGKWNKKLLDEAIFAMHENTLRTHTSAADLFALDYGAESEYQVFPGEEITIAKGYVSIMEHLASLLPPGLVQLGRRVTRIEWQPEGHEPMNMENGTCSRPVMLHFCDSSTMSADHVIVTVSLGVLKAAIRGDDSGMLMFHPPLPTFKVEAISRLGFGVVNKLFMQLSPQHEKRDEISKGFPFLHMVFHSPHSELGHKKIPWWMKKTASLCPIYNHSSVLLGWFAGEEALALESLKDEEIIEGVSDTISCFLSHSLVFCNGNVDSHKYEVKFSKVLKSQWGTDPLFLGSYSHVTVGSSGDDFDTMAEPLPKSGRRSHSCASPQLQILFAGEATHRTYYSTTHGAYFSGLREANRLLQHYSLC 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02472 532 SUPERFAMILY FAD-linked reductases, C-terminal domain 326 462 - -
Cca11g02472 532 PANTHER POLYAMINE OXIDASE 5-RELATED 1 530 - -
Cca11g02472 532 Gene3D - 8 524 IPR036188 -
Cca11g02472 532 PANTHER FLAVIN MONOAMINE OXIDASE 1 530 - -
Cca11g02472 532 SUPERFAMILY FAD/NAD(P)-binding domain 1 529 IPR036188 -
Cca11g02472 532 Gene3D - 94 468 - -
Cca11g02472 532 Pfam Flavin containing amine oxidoreductase 15 526 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02472 Cca-Chr11 51860246 51861844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02472 K12259 - gmx:100809633 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02472 11 51860246 51861844 Cca11g02472 11 51860246 51861844 ECH
Cca11g02472 11 51860246 51861844 Cca08g01465 08 43447943 43450980 PCT