Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02451 ATGATAACCGGCAAGGACATTTATGATGTTTTTGCGGCTATTGTGCCTCTCTACGTGGCTATGATATTAGCATATGGTTCAGTTCGGTGGTGGAAAATTTTCACACCTGATCAATGTTCTGGAATAAACCGCTTTGTTGCTGTCTTCGCTGTTCCATTGCTTTCTTTCCACTTCATATCCTCCAATGATCCTTATGCTATGAACTACCACTTCATAGCAGCTGATTCTCTTCAAAAGGTTGTCATTCTTGGTGCTCTCTTTCTATGGAACACCTTTACAAATCATGGAAGCCTTGACTGGACCATCACCCTCTTCTCACTTTCCACTCTCCCAAACACACTTGTCATGGGGATCCCTTTATTGAAGGCGATGTATGGAGACTTCTCAGGGAGCCTCATGGTCCAAATTGTGGTGTTGCAAAGTGTCATTTGGTACACTCTCATGCTCTTCATGTTTGAGTATAGAGGTGCCAAGCTCCTCATCACAGAACAGTTCCCTGAGACTGCAGGCTCCATCACCTCCTTCAGGGTTGACTCAGATGTTGTCTCACTCAATGGTAGAGAGCCACTTCAAACCGATGCTGAGATAGGAGAAGATGGAAAACTCCACGTGGTGGTTAAGAGATCAGCAGCTTCTTCCATGATATCTTCCTTCAACAAGTCTCACTTAACTTCCATGACTCCTAGAGCATCCAATCTCACTGGGGTTGAGATCTATTCTGTTCAGTCATCAAGGGAACCGACCCCAAGAGCTTCAAGTTTCAACCAAACGGATTTCTATGCCATGTTTGCAAGCAAGGCACCGAGTCCAAAACATGGATACACAAATAGTTTCCAGAGTAATAGTGGTATCGGTGATGTTTACTCTTTGCAATCTTCAAAAGGGGCAACACCAAGGACTTCTAATTTTGAAGAGGAGATGTTGAAGATGCACAAGAAGAGAGGAGGGAGGAGCATGAGTGGAGAGTTGTTTAATGGGGGTATGGTTTCTTCCTACCCTCCTCCGAATCCAATGTTTTCAGGGTCTACCAGTGCTGGTGGCACCAAAAAGAAAGATAGCACTAGTGTTGGTGCTGCTCCAAATAAGGAGTTACACATGTTTGTTTGGAGTTCAAGTGCATCACCAGTTTCTGAGGGGAATTTGAGGCATGCAGTTAATAGAGCTGCTTCTACCGACTTTGCAACAGTCGATCCTTCTAAGGCTGTTCCACATGAAACTGTTGCCTCAAAAGCTGTTCATGAATTGATTGAGAACATGAGTCCTGGTCGTAGAGAGAGGGAGCCTGAAATGGAGGAAGGAGGCAAATTTCCCACTAGTGGATCTCCATACACGTGCCAGAAGAAGGTGGACATGGAAGATGGCAATGTAAACAAAAACCAACAGATGCCACCCGCAAGTGTCATGACAAGGCTCATCCTCATCATGGTTTGGAGGAAACTCATTAGAAATCCTAATACCTACTCAAGTCTTTTGGGACTCACATGGTCTCTCATTTCATATAGGTGGCACATTGAAATGCCAACTATTGTAAAAGGTTCCATCTCAATACTCTCTGATGCTGGTCTCGGAATGGCCATGTTCAGTCTAGGTCTGTTTATGGCATTACAACCCAAGATCATTGCCTGTGGAAAGTCTGTGGCAGCATTTTCTATGGCTGTTAGGTTCTTGACAGGTCCAGCTGTGATTGCTGCAACCTCCATAGGCATCGGAATCCGTGGAGTTCTTTTGCATGTTGCAATTGTCCAGGCAGCTCTTCCCCAAGGCATAGTTCCCTTTGTTTTTGCTAAAGAGTACAATCTCCATGCAGATATTCTAAGTACTGCAGTTATATTTGGAATGCTGATTGCATTGCCCATAACAATACTCTACTACGTGCTGCTTGGAGTCTAG 1890 0.445 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADSLQKVVILGALFLWNTFTNHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREPLQTDAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSNSGIGDVYSLQSSKGATPRTSNFEEEMLKMHKKRGGRSMSGELFNGGMVSSYPPPNPMFSGSTSAGGTKKKDSTSVGAAPNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFATVDPSKAVPHETVASKAVHELIENMSPGRREREPEMEEGGKFPTSGSPYTCQKKVDMEDGNVNKNQQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLTWSLISYRWHIEMPTIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLIALPITILYYVLLGV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02451 629 MobiDBLite consensus disorder prediction 336 355 - -
Cca11g02451 629 MobiDBLite consensus disorder prediction 421 444 - -
Cca11g02451 629 TIGRFAM 2a69: auxin efflux carrier 1 628 IPR014024 -
Cca11g02451 629 MobiDBLite consensus disorder prediction 336 359 - -
Cca11g02451 629 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 629 IPR033526 GO:0010315|GO:0010329
Cca11g02451 629 Pfam Membrane transport protein 10 624 IPR004776 GO:0016021|GO:0055085
Cca11g02451 629 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02451 Cca-Chr11 51564844 51568435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02451 102 629 Organic Solute Cotransporters AT5G57090 74.275 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02451 K13947 - gmx:100305383 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02451 11 51564844 51568435 Cca11g02451 11 51564844 51568435 ECH
Cca11g02451 11 51564844 51568435 Cca08g01477 08 43702721 43707146 PCT