Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02423 ATGGGATGTTCTCAATCAAGGTTGGATGATGAAGAGGCAGTTAAGCTTTGCAAAGACAGAAAGCGGTTCATCAAACAGGCAGTTGAGCAAAGAACTCAATTTGCTACTGGACATGTAGCATACATTCAGTCTCTGAAAAGGGTTTCAACCGCACTTCGTGATTACTTTGAAGGAGATGAACCATGCGAGATGTCATTAGATTCATTCATAAGCCCACCTTTCACACCTGTGAACAAAACTAGCACTACCTTCATTCCCATATCATCAAAATCCTTCTCCCCGACAACAATTGAGTTTGGTCCCAGAACAACTTTGAAGGTGAATTACCTAAGGCCAGGTGGTAATCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCGCCTGAAATGGTTCGGGTTGAAACTTATTCTCCCATGCACCAGTTTGGCATTGATGGTTTTTTCCCCATGCAATCCTCACCTATGAATCCTTCAGTTTTTGCTTACTCTCCCAATAACAGGCCTAATATCCCTCCACCTTCACCTCAATCTTCCCAATGGGAATCATTTTGGAACCCATTTTCATCATTGGACTATTATGGTTACCCCAGAAGAAACCCTGGAATGGATGATGAGATCAGAGAAATGATGCAGGTCCGAGAAGAAGAAGGAATACCGGACCTGGAAGAAGATGAAACTGAACAAGAAGGTTTTGTTGTGAAGAGAAATGTAGCAGAAGAAAGAGCCAAAATTGATGTCAACCCTGCCAAAGAAGAAGTCACGGTTGAAGATGTTGATGAACATAaggaggaggaggaggaagaggaggGAAAAGATGCTGGAACTGGAACTGCTGATGATGTCACAAACTCGCAAGCCAATGGCAGTGAATGTTTTCAAGTATCTAAAGCTCAAACTGCAGGTCAGGAAATGGCTACTGGTAATCAAGAAGCTAAGGAGGAAACACCTGGTTTTACTGTTTATGTAGACAGAAGACCCACAAGCATGTCTGAAGTGATCAGGGGTCTTGAAGCTCAATTCACAATAATCTGCAATGCAGCCAGTGATGTCTCAGCATTGTTAGAGGCCAAGAAAACTCAGTATTTATCAACTTCTAACGAACTATCAGCATCAAAATTGTTGAACCCAGTAGCGCTGTTTCGCGCAGCTTCTTCACGCTCAACCTCATCAAGATTTTTAATGAATTCTTCAGGAACTATGGATGAGGTTTGCGAAATCACCGATGATCCACTAGAGGAACATTGCTTGTTTTCTGTTAGTCATCAGTCAACATTAGACAGGTTATATGCATGGGAGAAGAAGCTCTTTGAGGAAGTCAAGTCTGGAGAACGTGTTCGTATTGCATATGAGAAGAAATGTCAGCAACTCAGGAATCATGATATAAATGGAGAGGAACCCTCTTCTGTTGATAAAACAAGAGCAGCCATTAGAGATCTACATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAGAAGAATTGAAACTCTAAGAGATGAAGAGTTGCATCCCCAGCTACTTGAATTGGTGCAAGGGCTTGCCAAGATGTGGAAAGTGATGGCAGAATGCCATCAGACACAGAAGAGAACGTTAGAGGAAGCTAAGATTCTTCTAGTTGACACTGATGCCAGAAAACAATGTGCCACATCACTAACTGATCCGCAAAGGCTTGCTCGTTCAGCCTCCAATCTTGAAACTGAATTGAGGCATTGGCGAAACACTTTTGAGGCATGGATCACTTCTCAAAGATCCTACATTCATGCTCTAACTGGCTGGCTTCTAAGATGTGTGAGATGTGAGCCTGATCCATCAAAGCTAGCATGTTCTCCCCGAAGGTCTAGTGGCATTCATCCGTTGTTTGGACTTTGTGTTCAGTTGTCAAGGCGTCTAGATGCTCTCGAAGAAACATCAGTGCTTGAAGGCATAGATTTTTTTGCAGCTGGCATGGGGTCCCTCTATGAACAACAGTTAAGAGAAGAGAATCGGCGAAATCCGGTTGGATCAAAAGAACATAGTGAGAATATGGAAATGGTAGAAATTGATCAGGTTGAAGAGGTAATGAATACTGAGAAATTGGTTGAAGTTGCTGTTAAGGTGCTTTGTGCTGGTATGTCAACTGCTATGAGCTCAATGGCAGAGTTTGCTGTTGACTATGCTGAGGGATATAATGAACTTGTTAAGAAATGGGACAATGTGAACTTGCAGCAGATTTCTTGTGGAACTGAAACATAG 2238 0.4178 MGCSQSRLDDEEAVKLCKDRKRFIKQAVEQRTQFATGHVAYIQSLKRVSTALRDYFEGDEPCEMSLDSFISPPFTPVNKTSTTFIPISSKSFSPTTIEFGPRTTLKVNYLRPGGNPAISVEERPQSPEMVRVETYSPMHQFGIDGFFPMQSSPMNPSVFAYSPNNRPNIPPPSPQSSQWESFWNPFSSLDYYGYPRRNPGMDDEIREMMQVREEEGIPDLEEDETEQEGFVVKRNVAEERAKIDVNPAKEEVTVEDVDEHKEEEEEEEGKDAGTGTADDVTNSQANGSECFQVSKAQTAGQEMATGNQEAKEETPGFTVYVDRRPTSMSEVIRGLEAQFTIICNAASDVSALLEAKKTQYLSTSNELSASKLLNPVALFRAASSRSTSSRFLMNSSGTMDEVCEITDDPLEEHCLFSVSHQSTLDRLYAWEKKLFEEVKSGERVRIAYEKKCQQLRNHDINGEEPSSVDKTRAAIRDLHTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLAKMWKVMAECHQTQKRTLEEAKILLVDTDARKQCATSLTDPQRLARSASNLETELRHWRNTFEAWITSQRSYIHALTGWLLRCVRCEPDPSKLACSPRRSSGIHPLFGLCVQLSRRLDALEETSVLEGIDFFAAGMGSLYEQQLREENRRNPVGSKEHSENMEMVEIDQVEEVMNTEKLVEVAVKVLCAGMSTAMSSMAEFAVDYAEGYNELVKKWDNVNLQQISCGTET 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02423 745 MobiDBLite consensus disorder prediction 247 284 - -
Cca11g02423 745 Pfam Protein of unknown function (DUF632) 328 651 IPR006867 -
Cca11g02423 745 MobiDBLite consensus disorder prediction 257 272 - -
Cca11g02423 745 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Cca11g02423 745 PANTHER UNCHARACTERIZED 1 738 - -
Cca11g02423 745 PANTHER DUF630 FAMILY PROTEIN 1 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02423 Cca-Chr11 51115602 51120021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02423 1 230 Acyl Lipid Metabolism Gene Families AT2G27090 29.150 2.48e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02423 - - gmx:100818631 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02423 11 51115602 51120021 Cca11g02423 11 51115602 51120021 ECH
Cca11g02423 11 51115602 51120021 Cca08g01521 08 45045109 45049125 PCT