Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01521 ATGGGATGTTCACATTCAAAGTTGGATGATGAAGAGTCAGTTCGGCTTTGTAAAGACAGAAAGAAGTTCATCAAGCAAGCTGTTGAACAAAGGACTCGATTTGCCACAGGACACATAGCATACATAGAATCACTGAAAAGGGTTTCAGCAGCACTTCGTGATTACATTGAAGGCGATGAGCCTCGTGAGTTCTCATTAGATACGGTCATCACACCACCTTTCACACCTGTGAAGAAGAAAACTGGCCCAGGATTTATTCCCATATCAGCAAAGCCCTTCACAACAGCAACAGCAATTGAGTTCGGGGTTGGACCAAACTCTACTTTGAAAGTGAATTACCTTAGGCCTGGTGGTAACCCTGCAATTTCAGTTGAGGAAAGGCCTCAATCCCCCGAAAGGGTTCGGGTTGAGACGTATTATTCTCCAATGCAGCAGTATCAGCAGTATGGCATTGATGGTTTTTTCAACATGCAATCCTCACCAGTGAATCCCTCAATTTTTGCTTACTCTCCCAATGATAGGCCTAATATCCCTCCCCCTTCACCTCAAGCTTCCCAATGGGACTTCTTTTGGAACCCCTTTTCATCATTGGATAGTTATGGTTATCCTGCAAGAAGTAGCCTTGATCAGACTGCTATGGATTATGAATACAGGGGACTTAGGCAGGTTAGAGAAGAAGAGGGAATACCAGACCTGGAAGAAGATGAAACTGAACAAGAAGATTGTGTTGGGAAGAGAAATGAAGCAGAAAAAAGAACTAGACATGATATAAATTCTTCCAAAGAAGAAGTTATTGTTGAAGATGTTGATgacgaggacgaggacgaggatgaggatgaggatgaggacgaggaGGATGAGGACGAAGAAGAGGAGGGAACAGACATTGAAGATGAAACTGAAACTGAGCATGATGCCAAAGGTTCACAAGCTCATGGTGGTGCAAGTTTTGAAGTGTCAAAATCTCAAGCTGCAGGTCATATTGAATCAAGCCACAGGGAAATGGCAATTGGTAAGAAGGAATCTGGGGAAGAAACACCAGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATTAATGATCTTGAAACTCAATTCACAATCGTCTGCAATGCAGCCAATGAAGTCTCAGCACTATTAGAGGCCAAGAAATCTCAGTATTTATCGACATCTAATGAACTTTCAGCATCAAAGTTGTTGAACCCAGTAGCTTTGATCCGCTCTGCTTCTTCACGCTCTTCTTCATCAAGATTTTTAGTTAATTGTTCAAGCACTAGCAAGGAAGGTTGTGAAGGAACTAAAGGTCTCTCAGAGGAACATTGTATGTTATCTGGTAGTCACCACTCCACTTTAGACAGATTAAATGCATGGGAGAAGAAGCTATATGAGGAAGTCAGGTCTGGAGAACGTATCAGAATTGCGTATGAGAAGAAATTGAAGCAACTCAGGAACCTTGATATAAAAGGAGAGGACCCCTCTTGTGCAGATAGAACAAGAGCAGCCATTAGAGATCTAGATACCCAGATTACAGTTTCAATACACTCGGTTGAAGCTATTTCAAGGAGAATCGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGGTGCAAGGGCTGGAAAAGATGTGGAAAGTGATGGCAGAATGCCATCAGACACAGAAGAGAACCTTAGATGAAGCTAAGATTCTTCTAGCTGGCACTCCTTCTAAATCACATTCCAGAAAACAGTCTTCCATGTCAATGACTGATCCAAGCAGGCTGGCGCGTTCAGCCTCGAATCTTGAATTCGAGTTAAGGAACTGGAGAAACACCTTCGAGTCATGGATCACTTCTCAAAGATCCTACATTCAGGCCTTAACAGGATGGCTTCTTCGATGCATGAGATCCGAACCTGACGTGTCAAAGTTACCAGGCTCTCCTCACCGGTCCAGTGGCACTCACCCTTTGTTTGGACTCTGCATTCAGTGGTCGAGGCGCCTAGATGCCATACATGAAAAGGCAGTGCTTGAAGGCCTAGACTTTTTTGCAGCTGGGATGGGGTCCCTCTATGCACATCAGTTAAGAGAAGATTCAAGGAGAAACTCATATGGATCAAAACAAAGCAATGGCATGGAAATGGTGGAAGTTGGTGAGGTGGAAGAGGTAATGGCTCCAGAGAAGCTGGCTGAAGTGGCTATTAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCTGAGTTTGCTTTGGATTCTGCTGACGGGTACAATGAAGTTGTTAAGCAATGGAACAATGTGAAGTGTCAAAATACTACTTCTAGTGAGACAAGAACATAG 2346 0.425 MGCSHSKLDDEESVRLCKDRKKFIKQAVEQRTRFATGHIAYIESLKRVSAALRDYIEGDEPREFSLDTVITPPFTPVKKKTGPGFIPISAKPFTTATAIEFGVGPNSTLKVNYLRPGGNPAISVEERPQSPERVRVETYYSPMQQYQQYGIDGFFNMQSSPVNPSIFAYSPNDRPNIPPPSPQASQWDFFWNPFSSLDSYGYPARSSLDQTAMDYEYRGLRQVREEEGIPDLEEDETEQEDCVGKRNEAEKRTRHDINSSKEEVIVEDVDDEDEDEDEDEDEDEEDEDEEEEGTDIEDETETEHDAKGSQAHGGASFEVSKSQAAGHIESSHREMAIGKKESGEETPGFTVYVNRRPTSMAEVINDLETQFTIVCNAANEVSALLEAKKSQYLSTSNELSASKLLNPVALIRSASSRSSSSRFLVNCSSTSKEGCEGTKGLSEEHCMLSGSHHSTLDRLNAWEKKLYEEVRSGERIRIAYEKKLKQLRNLDIKGEDPSCADRTRAAIRDLDTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKSHSRKQSSMSMTDPSRLARSASNLEFELRNWRNTFESWITSQRSYIQALTGWLLRCMRSEPDVSKLPGSPHRSSGTHPLFGLCIQWSRRLDAIHEKAVLEGLDFFAAGMGSLYAHQLREDSRRNSYGSKQSNGMEMVEVGEVEEVMAPEKLAEVAIKVLCAGMSVAISSLAEFALDSADGYNEVVKQWNNVKCQNTTSSETRT 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01521 781 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Cca08g01521 781 Pfam Protein of unknown function (DUF632) 360 687 IPR006867 -
Cca08g01521 781 PANTHER UNCHARACTERIZED 1 781 - -
Cca08g01521 781 MobiDBLite consensus disorder prediction 574 594 - -
Cca08g01521 781 MobiDBLite consensus disorder prediction 577 594 - -
Cca08g01521 781 MobiDBLite consensus disorder prediction 225 350 - -
Cca08g01521 781 MobiDBLite consensus disorder prediction 265 299 - -
Cca08g01521 781 MobiDBLite consensus disorder prediction 239 264 - -
Cca08g01521 781 PANTHER DUF630 FAMILY PROTEIN 1 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01521 Cca-Chr8 45045109 45049125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01521 436 710 Acyl Lipid Metabolism Gene Families AT2G27090 36.786 6.41e-48 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01521 - - gmx:100780704 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01521 08 45045109 45049125 Cca08g01521 08 45045109 45049125 ECH
Cca11g02423 11 51115602 51120021 Cca08g01521 08 45045109 45049125 PCT