Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02422 ATGGCGGAAGTTAACACTTTGGTGGTGCGAAAGCCCTGTTTTGGCCTCCCAACTGGTTGCCCTCAATGCCTCTCTGCTTACATCTATCTCAAGTTCGCTCAATTTCCCTTCTTCTTGGACTTCCACCTCAACAACCCTCATTCTGATCAAATTCCTTACTTTGAGGTTGGTGACACTGTGGCTTATAATAATGAGAAAGAAGGGATCATTGAATGCTTGAAGAAAGATGTTGGCGTAGTTGATTTAGACAGTGGAGTTTCTTCACTCCCTGATTGGATTTCAACCAAAGCAATTCTCACCGCTTGGCTTGCTGATGCACTTGCCTATGAACTCTGGCTTGGGTGTGAAGGTTCCTCTGCTTATACTATCTATTACTCTGATCTTCCGTGGCCGTTGGGGAAGATTCTATTTTGGAAGAAAGCTCATTGGGTGAAGTTGAAGCATGGGATAACTAATGACAATGCTGAAGTGAAGAAAGAAGAGATTTACGAGAGAGCAAAGTCTGCATATGATGCCTTGTCAAGTTGCTTAGGTGAACAGAATTACTTATTTGAGAACAGGCCATCAAGCTTGGATGCTATTTTTCTTGCACATGGACTAGTTGTTCTTCAAGCTTTACCTGAGTCTTCAATGCTGCGGACCAAGTTTTTGGAGCATGCTAATTTAGTTAGATATGTGCAACAATGTAAGACAGAACTTATTGAAGCCGCTCCATCTCCTCCCTCTGGCCCACAATTTCATACCAATGCATCATCGTCTGCTCCCAAAAGTCATTCAAGTTCAAAGCCAAAGAACAAACCCAAAAGAGAGAAAACAAAGGAGGAGAAAACCTTCAAAAGGAAGGCCAAATATTTTGTAGCAGCACAGTTGGTTGCAGTTGTTGTTTTCCTCACACTTATGACTTCATTtgatgatgctgaactggagttagatgatgctgatgggggttatgattactatgagtga 966 0.3975 MAEVNTLVVRKPCFGLPTGCPQCLSAYIYLKFAQFPFFLDFHLNNPHSDQIPYFEVGDTVAYNNEKEGIIECLKKDVGVVDLDSGVSSLPDWISTKAILTAWLADALAYELWLGCEGSSAYTIYYSDLPWPLGKILFWKKAHWVKLKHGITNDNAEVKKEEIYERAKSAYDALSSCLGEQNYLFENRPSSLDAIFLAHGLVVLQALPESSMLRTKFLEHANLVRYVQQCKTELIEAAPSPPSGPQFHTNASSSAPKSHSSSKPKNKPKREKTKEEKTFKRKAKYFVAAQLVAVVVFLTLMTSFDDAELELDDADGGYDYYE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02422 321 CDD GST_C_Metaxin 161 226 - -
Cca11g02422 321 Pfam Glutathione S-transferase N-terminal domain 21 113 IPR012336 -
Cca11g02422 321 MobiDBLite consensus disorder prediction 236 275 - -
Cca11g02422 321 Pfam Glutathione S-transferase, C-terminal domain 166 228 IPR033468 -
Cca11g02422 321 MobiDBLite consensus disorder prediction 242 260 - -
Cca11g02422 321 PIRSF Metaxin 1 316 IPR017410 GO:0001401|GO:0007005
Cca11g02422 321 PANTHER PROTEIN, PUTATIVE-RELATED 1 318 - -
Cca11g02422 321 PANTHER METAXIN RELATED 1 318 - -
Cca11g02422 321 SUPERFAMILY GST C-terminal domain-like 152 230 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02422 Cca-Chr11 51110211 51114065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02422 K17776 - gmx:100807761 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02422 11 51110211 51114065 Cca11g02422 11 51110211 51114065 ECH
Cca11g02422 11 51110211 51114065 Cca08g01522 08 45057983 45065255 PCT