Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01522 ATGGCAACGGAACAGAATGAGAGCACACAAAGGAACAACCTTGTCGTCAGAAAACCATGTTTTGGTCTCCCAACCGGTTGCCCTCAATGTCTGTCAGCTTACATCTTTCTCAAGCTCTCTCAACATCCCTTCAACTTAGACTACCACCCTAACTACCCTGATTCTGATCAGATTCCTTACTATGAGGCTGGTGATTGTGTGGCATATAATAATGAGAAGGAGGGGATCGTTGAGTGCTTGAAAAGGGATGTGGGTGATTTAGATAGTGGGGTTTCTTCTCTCCCTGATTGGATACCAACCAAGGTGATGCTTACCACCTGGCTTGCTGATGCACTTGAGTATGAACTATGGGTGGGATGTGACAGTTCCTCGGCTTATGGTATCTATTATTCTGACCTCCCCTGGCCTATAGGGAAGGTCTTGTTATGGAAGAAAGCTGTCTGGGTAAAGCAGAAACATGGGATAAATAAAGACAATGCTGAAGTAAAGGAAGAAGAGATTTATGCGAGAGCAAACTCTGCATATGATGCTCTGTCGACTTGGTTAGGGGAACAGAACTACCTTTTCGAAAACAGGCCATCCAGCTTGGATGCTATTTTTCTTGCACATGCATTAGTTGTTCTTCAAGCTTTACCTGAATCATCAATTTTGAGGTCCAAGTTTTTGGAGCATGCCAATTTAGAGAGATATGTGCAACAACACAAGACAGAACTTATAGAAGCTGGTACTTCTCCTTCCAATGATCCACATTTGCATGCAGACCCATCATCATCAGCTTCTAGTAGTCGTTCAACTTCAAGTTCAAAGCCCAAGACTAAACCCAAAAAAAAGCCACAAACAAAGGAGGAGAAAACCTTTAGAAGAAGGGCTAAATATTTTGTGGTAGCACAGGTGGTTGCTTTGGTTCTTTTCTACAGTGTCATCTCTGGATAG 933 0.4298 MATEQNESTQRNNLVVRKPCFGLPTGCPQCLSAYIFLKLSQHPFNLDYHPNYPDSDQIPYYEAGDCVAYNNEKEGIVECLKRDVGDLDSGVSSLPDWIPTKVMLTTWLADALEYELWVGCDSSSAYGIYYSDLPWPIGKVLLWKKAVWVKQKHGINKDNAEVKEEEIYARANSAYDALSTWLGEQNYLFENRPSSLDAIFLAHALVVLQALPESSILRSKFLEHANLERYVQQHKTELIEAGTSPSNDPHLHADPSSSASSSRSTSSSKPKTKPKKKPQTKEEKTFRRRAKYFVVAQVVALVLFYSVISG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01522 310 Pfam Glutathione S-transferase, C-terminal domain 171 233 IPR033468 -
Cca08g01522 310 MobiDBLite consensus disorder prediction 241 268 - -
Cca08g01522 310 MobiDBLite consensus disorder prediction 241 284 - -
Cca08g01522 310 Pfam Glutathione S-transferase N-terminal domain 28 118 IPR012336 -
Cca08g01522 310 CDD GST_C_Metaxin 166 231 - -
Cca08g01522 310 PANTHER METAXIN RELATED 12 308 - -
Cca08g01522 310 PANTHER PROTEIN, PUTATIVE-RELATED 12 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01522 Cca-Chr8 45057983 45065255 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01522 K17776 - gmx:100809392 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01522 08 45057983 45065255 Cca08g01522 08 45057983 45065255 ECH
Cca11g02422 11 51110211 51114065 Cca08g01522 08 45057983 45065255 PCT