Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02415 ATGAGTACCGAAAAGACTCCTTCATCAGCTTCTTCTTCGAGTAGCTACGTTTTCTGCAAGGGCTTCAATGGCCTCGACAAGGTTCTTCTCCGCGACGCTCGTGGTAGCTCCGCTGAGGTGTACTTGTACGGTGGTCACGTGACTTCTTGGAAGAATGAGCATGCCGAGGAATTGCTCTTTCTCAGTAGCAAGgctatatttaaacctccaaaggcaattcgtggagggatcccaatatgttttccccaaTTTGGAAGCCTCGGTACTCTCGACCAGCATGGATTTGCTAGAAACCGGTTCTGGACCATTGATGATTGCCCTCCTCCTTTTCCAACAAATACTCTGAATAAAGCCTTTGTTGATTTGATTCTTAAACCCACTGAAGATGACATCAAGATTTGGCCTCACAGTTTTGAATTTCGACTCAGAGTGGCTCTTGGACCTGGAGGAGATCTGATGTTGACATCTCGGATCAGGAACACTAACATTGATGGGAAGCCATTTTCATTCACATTTGCTTATCATACATATTTCTCTGTGTCTGATATAAGTGAAGTGCGGGTAGAGGGATTAGAGACAATGGATTATCTTGACAACTTGCAGAAAAAGGAACGCTTTACTGAACAGGGAGATGCTTTAACATTTGAATCAGAAGTTGATAAGGTATATCTCAGCACCCCTACAAAGATTGCGATTCTTGATCATGAGAAAAAGAGAACATTTGTATTACGTAAAGATGGTCTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAAAAAGCAAAGGCTATGTCTGATTTCGGTGATGATGAGTATAAGCATATGCTTTGTGTAGAGGCTGCTGCTATTGAAAAGCCTATCACTTTGAAACCTGGCGAGGAATGGAAGGGAAGACTGGAACTTTCAACAGTTCCTTCTAGTTATTGTAGTGGGCAGCTTGATCCCCGAAGAGTTCTTCAAGGAAGCTGA 969 0.4087 MSTEKTPSSASSSSSYVFCKGFNGLDKVLLRDARGSSAEVYLYGGHVTSWKNEHAEELLFLSSKAIFKPPKAIRGGIPICFPQFGSLGTLDQHGFARNRFWTIDDCPPPFPTNTLNKAFVDLILKPTEDDIKIWPHSFEFRLRVALGPGGDLMLTSRIRNTNIDGKPFSFTFAYHTYFSVSDISEVRVEGLETMDYLDNLQKKERFTEQGDALTFESEVDKVYLSTPTKIAILDHEKKRTFVLRKDGLPDAVVWNPWDKKAKAMSDFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSTVPSSYCSGQLDPRRVLQGS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02415 322 CDD D-hex-6-P-epi_like 32 302 IPR025532 -
Cca11g02415 322 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 8 317 - -
Cca11g02415 322 PIRSF PHexose_mutarotase 3 308 IPR025532 -
Cca11g02415 322 Gene3D - 23 308 IPR014718 GO:0030246
Cca11g02415 322 Pfam Aldose 1-epimerase 26 301 IPR008183 GO:0005975|GO:0016853
Cca11g02415 322 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 8 317 - -
Cca11g02415 322 SUPERFAMILY Galactose mutarotase-like 19 301 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02415 Cca-Chr11 51024695 51033052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02415 K01792 - gmx:100809080 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02415 11 51024695 51033052 Cca08g01526 08 45169719 45177286 PCT