Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01526 atGAGCAGCGAAAAGGAGAAAACAACCGCACCTTCTTCTTCTCCTTCGCCCTCCGTCGATCTCTGCAAAAGCATCAATGGCCTCGACAAGGTTCTCCTCCGCGAATCGCGTGGCTCCTCCGCCGAGGTGTACCTGTACGGAGGTCACGTGACTTCTTGGAAGAGCGACCACGGCGAGGAATTGCTTTTTCTCAGTAGTAAGGCTATATTTAAGCCTCCAAAGGCAATTCGTGGAGGGATTCCAATATGCTTTCCACAATTTGGAGGCCTTGGCACCCTTGACCAGCATGGATTTGCTAGAAATCGATTCTGGAACATTGACGATGACCCTCCTCCTTTTCCTACAAATACATTGAGCAAAGCCTTTGTTGATTTGATTCTTAAGCCATCTGAAGAAGACATGAAGAGTTGGCCTCATAGTTTTGAATACCGTCTTAGGATAGCTTTGGGACCAGGAGGAGATCTGATGCTGACATCTCGGATCAGGAACACTAACAGTGACGGAAAGCCATTTTCATTCACGTTCGCATATCATACATATTTCTCTGTATCAGACATAAGTGAAGTTCGGGTAGAGGGATTGGAGACTCTGGATTATCTTGATAACTTGCAGAACAAGGAGCGCTTTACTGAACAGGGAGATGCATTAACGTTTGAATCTGAAGTTGACAAGATATATCTTAGCACTCCCACAAAGATTGCAATTATTGATCATGAAAAGAAGAGAACATTTGTTGTGCGTAAAGATGGCCTTCCCGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCCATGGCTGATTTTGGTGATGATGAGTACAAGCATATGCTCTGTGTAGAGGCTGCTGCAATTGAAAAGCCTATCACTTTGAAACCTGGAGAAGAATGGAAAGGAAGGTTAGAGCTTTCAGCTGTTCCCTCTAGTTATTGCAGTGGACAACTTGATCCCCAGAGAGTTCTTCAGGGAAGCTGA 978 0.4519 MSSEKEKTTAPSSSPSPSVDLCKSINGLDKVLLRESRGSSAEVYLYGGHVTSWKSDHGEELLFLSSKAIFKPPKAIRGGIPICFPQFGGLGTLDQHGFARNRFWNIDDDPPPFPTNTLSKAFVDLILKPSEEDMKSWPHSFEYRLRIALGPGGDLMLTSRIRNTNSDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDALTFESEVDKIYLSTPTKIAIIDHEKKRTFVVRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAVPSSYCSGQLDPQRVLQGS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01526 325 Gene3D - 25 311 IPR014718 GO:0030246
Cca08g01526 325 PIRSF PHexose_mutarotase 6 311 IPR025532 -
Cca08g01526 325 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 10 320 - -
Cca08g01526 325 SUPERFAMILY Galactose mutarotase-like 25 304 IPR011013 GO:0003824|GO:0005975|GO:0030246
Cca08g01526 325 MobiDBLite consensus disorder prediction 1 21 - -
Cca08g01526 325 CDD D-hex-6-P-epi_like 35 305 IPR025532 -
Cca08g01526 325 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 10 320 - -
Cca08g01526 325 Pfam Aldose 1-epimerase 30 304 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01526 Cca-Chr8 45169719 45177286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01526 K01792 - gmx:100807970 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01526 08 45169719 45177286 Cca08g01526 08 45169719 45177286 ECH
Cca11g02415 11 51024695 51033052 Cca08g01526 08 45169719 45177286 PCT