Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02413 ATGAGAACTTGGAATTTGCAGGTAAGAGAGCTACACCGGATATATAGTGTGCAAAAGAGGCTGATGGAGGAGCTCAAAAATGAAATTAGACAACAGAAATTTTGGAACCACGTGAATGACATAGATGTAAACCACCCACATTCTATTAAACAACATCATCAAACCACACAGATTTCACACAAGCCTGATTTCAGCGTTCAAAATTTGAGAGAGGACCTAAATACAAGAGAAAAGAGTGTATGCTGCTCTGGAAACACCATCCAGAGGCAAAGAGGTTTTGATCTTGAAAGGCCAGCTGAGGAAGACGTTTTTACTCAAGCACGTGGCTTTGATGAAGGTGAGGCAGGGCCTAGCTCCAACACTGCACTTCAGAGTTGTAAAATAAGTACTACTGGTGGCTATGATGAAGAAGTGGAAGTGGATTTGACACTAAGTATAGGAGGTAGTAAAGTTAAGAACTCTCGTTTACCTCAATTAGCATGCTCAAACTCAACCAAAGGGAAAACTAGGAACCTCAATTCTTCCGGCTCCTTCCAATCAGATAGAGATAGAACAGGAGAATGCAGTGACCCCACCACCCCAATGAGCAGCTCCACTGTGAAATTTACTCAGCAAGGAAAGGGGCCACATTGGCTTTCTCAAAGTCTAAAGCTTAAATAG 660 0.4227 MRTWNLQVRELHRIYSVQKRLMEELKNEIRQQKFWNHVNDIDVNHPHSIKQHHQTTQISHKPDFSVQNLREDLNTREKSVCCSGNTIQRQRGFDLERPAEEDVFTQARGFDEGEAGPSSNTALQSCKISTTGGYDEEVEVDLTLSIGGSKVKNSRLPQLACSNSTKGKTRNLNSSGSFQSDRDRTGECSDPTTPMSSSTVKFTQQGKGPHWLSQSLKLK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02413 219 Coils Coil 8 28 - -
Cca11g02413 219 MobiDBLite consensus disorder prediction 160 182 - -
Cca11g02413 219 PANTHER - 4 219 - -
Cca11g02413 219 MobiDBLite consensus disorder prediction 160 219 - -
Cca11g02413 219 PANTHER - 4 219 - -
Cca11g02413 219 MobiDBLite consensus disorder prediction 189 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02413 Cca-Chr11 51010744 51014729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02413 - - gmx:100797300 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02413 11 51010744 51014729 Cca11g02413 11 51010744 51014729 ECH
Cca11g02413 11 51010744 51014729 Cca08g01528 08 45187437 45191666 PCT