Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01528 ATGTTAGTGTTGGTTTTATTAGTAGTACGACTAACCTATGGGAAAAAATGCTGGCATGAGGGAGGAAGATGCTCAATGAACTTCATCAGAGAAAGCTGCAATTTGGGCATGGGAACTCAAGTTGAATATTCCATAAATCTTCTAGCATCCTCAGTAGACAGCAACAACTTCATTGTGGGTGGTGTGGATATCTGGGAGCATTATCAGAACAAAGGAGTAAGTAACAACCATTGTAATATTGGAGTGAATAAATTGCAAAATCCAATGGATAGGATGTTTGACAGAAACAACATGGAATCTATCAAAAAGACAATGCAGATTCATGAAGACATCTTCAAACACCAGGTGAGGGAACTACACCGGGTATACAATGTGCAAAAGATGCTGATGGAGGACCTAAGAAAGGAAACAAAACAAAAGAAATTTTGGACCCCCATGAATGGCATACACATAAGCCATCCTCATTTCCTTcaacaacaacaacaacaacaaACTACACTAATTTCATATGGGCATGTTCAAAGTTTGAGAGAGGATCAATGCTCAAAGGAAAGGAGTGGAAGCTGTTCTGGAGAGACCATGAAGAGGCAAAGGGGTTTTGATCTTGAAAGGCCTACAGAGAGAGACATTTTTGGTGGCTGTGATGAAACTGAGGCAGGACCTAGCTCCAACAATGCACTTCAAAGATGTAAAATAAGCAATGGTGCCTCTAATGAAGACATGGAAGTGGATTTGACTTTAAGTATAGGAGGGAGCCAAGTTAAGAAGAATAATAACAAGAAACCTTATTTGCTTCCACTAGGGTGCTCAGACTCACCAAATGGGAAAACTAGGGAGCTAAATTCTTCTCTCTCTTTCCAATCAGATAGGGTGGGAGATTGCAGTGACCCCACCACCCCTATGAGCAGCTCCAGTGTGACATTTGATCAAGAGAGAAAGGGGCCCCATTGGCTTTCTCAAGGTTTAAAGCTTAAATAG 978 0.4029 MLVLVLLVVRLTYGKKCWHEGGRCSMNFIRESCNLGMGTQVEYSINLLASSVDSNNFIVGGVDIWEHYQNKGVSNNHCNIGVNKLQNPMDRMFDRNNMESIKKTMQIHEDIFKHQVRELHRVYNVQKMLMEDLRKETKQKKFWTPMNGIHISHPHFLQQQQQQQTTLISYGHVQSLREDQCSKERSGSCSGETMKRQRGFDLERPTERDIFGGCDETEAGPSSNNALQRCKISNGASNEDMEVDLTLSIGGSQVKKNNNKKPYLLPLGCSDSPNGKTRELNSSLSFQSDRVGDCSDPTTPMSSSSVTFDQERKGPHWLSQGLKLK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01528 325 MobiDBLite consensus disorder prediction 274 310 - -
Cca08g01528 325 MobiDBLite consensus disorder prediction 265 325 - -
Cca08g01528 325 PANTHER - 62 325 - -
Cca08g01528 325 PANTHER - 62 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01528 Cca-Chr8 45187437 45191666 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01528 - - ccaj:109803214 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g01528 08 45187437 45191666 Cca08g01528 08 45187437 45191666 ECH
Cca11g02413 11 51010744 51014729 Cca08g01528 08 45187437 45191666 PCT