Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02241 ATGGCGGCAGCTTCTAGAAAATCAAGAACTGCACTAATCGGATCCCTATCTTCTTCTTCTTCTAGATTCTGCAACTCTCACTCTCAATCGTCTTCTTCCTCAGCTTTCGCCTCTTCCACATCCAGTTTCTCTCGCTCCACCACCTTCTTTCACCGCGCCTCCTCTCCGACGCGTGTCAACCTCTCCGCTCCCTCCGTCCGCTTCTCCCTCGAACGTTCCGTCTCCCCGAACCGCTCCATCGCGGTGGCGCCGGGAACCGCCGCGTCCAGACAGGGCAAGCCGCACCAGCAGAAGCGCACCTGCATGTGCTCGCCTACGACGCACCCTGGCTCCTTCCGCTGCAGCCTCCACAAGAAGAGCAACCACGCCGCCGCCGCGGCGCCGTACTCGCCGAACCGTCTGAACGCGCGCAGATCTGCGATGACGAACTCGCTCGTGAGAATTCGCGGCGTGGAGGGGGATCTCGTGAAGCGAGCGCTCGCAGCGTTGATTCGACCTTCCTCGCACCAGCAGAGAAGGCGTGGCGACTTTCACCCGAGGCCTAGCAGGCTCTCCGTTATGTCCAAGGCGGAGGACCTGTGA 582 0.6117 MAAASRKSRTALIGSLSSSSSRFCNSHSQSSSSSAFASSTSSFSRSTTFFHRASSPTRVNLSAPSVRFSLERSVSPNRSIAVAPGTAASRQGKPHQQKRTCMCSPTTHPGSFRCSLHKKSNHAAAAAPYSPNRLNARRSAMTNSLVRIRGVEGDLVKRALAALIRPSSHQQRRRGDFHPRPSRLSVMSKAEDL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02241 193 PANTHER - 1 193 - -
Cca11g02241 193 MobiDBLite consensus disorder prediction 10 39 - -
Cca11g02241 193 MobiDBLite consensus disorder prediction 166 193 - -
Cca11g02241 193 MobiDBLite consensus disorder prediction 169 193 - -
Cca11g02241 193 MobiDBLite consensus disorder prediction 1 39 - -
Cca11g02241 193 PANTHER OSJNBB0118P14.9 PROTEIN 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02241 Cca-Chr11 48666208 48666789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02241 - - gmx:100781021 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02241 11 48666208 48666789 Cca05g00498 05 11059907 11060626 ECH
Cca11g02241 11 48666208 48666789 Cca11g02241 11 48666208 48666789 ECH