Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g00498 ATGGCGAGTTCTTCAAGAACAAAATCCAGTGGACCAGTGCTTCGTTCTCTTTCGCCTTCTAACAACAAGTTCTGTTCCTATTCAACGTCAAACGCACCGTTTCATACACCCTCTTCAAACTTCTTCAACAAGCCTCACTCACACGTTCCTCACCGCTCCACTTCCCCGACACGTGTCAACATATACAGCGCCGCGccctctccctcttcctcggtccggttctccctcgaccgctccatatcccCGAACCGGGCCGTGTCGAGCCACGTCATCGCGAAGAAAGGCCACGTCACGGCTCAGAAGAGAACGTGCATGTGCTCCCCAACGACGCATCCCGGTTCGTTCCGCTGCAGCCTCCACAAGAACCACCACGCGCCGTCCGGTTCGTTTCCGTCGAACCGGCTCAACATGCGCCGGTCCGCGATGAAGAACTCGCTTGTGAGAATCGGAGGAGTCGAAGGCGAGTGGGTGAAACGCGCCCTCACTGCGTTGATTCGTCCTTCGTCGCACCAACAGAGGAGAAGAGCCGCGTTCGAATCGAGACCGAGTCGTCTTTCAATCATGTCCATGGCTGTAGAAGATCTATGA 588 0.5068 MASSSRTKSSGPVLRSLSPSNNKFCSYSTSNAPFHTPSSNFFNKPHSHVPHRSTSPTRVNIYSAAPSPSSSVRFSLDRSISPNRAVSSHVIAKKGHVTAQKRTCMCSPTTHPGSFRCSLHKNHHAPSGSFPSNRLNMRRSAMKNSLVRIGGVEGEWVKRALTALIRPSSHQQRRRAAFESRPSRLSIMSMAVEDL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g00498 195 PANTHER - 1 191 - -
Cca05g00498 195 PANTHER OSJNBB0118P14.9 PROTEIN 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g00498 Cca-Chr5 11059907 11060626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g00498 - - gmx:100780557 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00498 05 11059907 11060626 Cca05g00498 05 11059907 11060626 ECH
Cca11g02241 11 48666208 48666789 Cca05g00498 05 11059907 11060626 ECH
Cca05g00498 05 11059907 11060626 Cca03g01599 03 34791837 34794756 PCT