Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02094 ATGGACTGGCCTGGGGTTAACAATCACTTCAGAACTTACAAAGTAGACGACCAAAAGTCCATGATGGATGTGGCACTCATTTCAAACATGGATCCTGTAAATATTGGGCTGGGTTGTTCTGATAAGCCGGCTCCTGTCACTCCACTCAAGCCAAGAAAGAAAACAATGACATCCGTCTATTTGAAGTTCTTTGAGACAGCTGCTGATGGCAAGACTAGGAGATGCAAGTTTTGTGGACAGAGCTATTCTATTGCAACCGCCACAGGCAATTTGGGAAGGCATCTAGCTAATCGTCACCCAGGTTATGACAAGTCTGGGGATGCTGTCAGCAATTCAGTGGTGCGGACGGTTGCTGTGGTCAAGAAGTCTCAGCATCAGGGAAAAGCAAGCCAGGTGGATTATGATCATCTAAATTGGTTGCTCATTAGGTGGCTTGTTTTAGCTTCTCTCCCTCCTTCTACTCTGGAAGAGAAGTGGCTTGTGAATTCCTACAAGTTTCTAAATCCAGCTATACAACTCTGGCCAAGTGACAAGTATAGAACTGTTCTTGATGAAGTTTTCAGAAGCATGAGGGAAGATGTAAGAGCATTGTTGGAACAGGTTCCTTCCAAGTTGTCCATTACACTTGATTTCTGGACCTCCTTTGAACAGATTTACTTTATGAGTGTAACATGTCAGTGGATCGACGAAAACTGGTGCTTCCAGAAGTTGCTTCTTGATATCTGTCGCATACCCTATCCATGTGGGGGTGCAGAGATTTATCGTTGCCTCATAAAAGTTCTTAAATTTTACAATATTGAAAACAGAATCCTGTCCTGTACCCATGATATTAGTACAAGTGCTATGCATGCCTGCCATACTTTGAAAGAGGACTTGGATGGTCAGAAAATAGGGCCGTTCTGTTATATTCCTTGTGCTGCTCGAACTTTGAATATGATAATAGATGATGGATTGAGGTCTGCGAAACAATTAATTTCTAAGATACGGGAGTTTGTTATTGAGTTAAATGCCTCACCAATGATCTCTGAGGATTTTATTCAGTTATCCACAGCTTATCAAGAAGGTACTTGGAAATTTCCTCTTGATGTTTCAGCAAGATGGAGCGGAAACTACCAAATGCTTGATCTTGTCCGCAAGGCAGGTAAGTCAGTGGATGCTGTTATTCGTAAATACGAGGAAATGCTGGGCAGTAGGATGCTGCTGGGATCTTCTGACAAAAGTGTGGTTAACATCATGCATCAATATCTTGAACCATTCTACAAAACCACAAACAACATCTGCACAAAGAATCACGTCACAGCCCAGATTGGCTCAAAAATGCTGCAGAAGAAATGGCTAAAAAGGCCAGAAATTATATTAATCAGAACCCATTTTATTAGAAATTATTCAACCAGCCATTTCTCATCCATGAGTTCTGGATACAATGGTCAAGAAATTGAAGATGGGGGAAGTGTTTCCTTTGCTGAGGAAATAGCACGCAAGAAGCGAAGGACAAGCATGAGTTCTGCCACTGACGAGCTTACACAGTATCTATCAGAAGCTCCAGCTCCAATACCGACTGATGTTCTAGAGTGGTGGAAGGTCAACAGTACACGCTACCCTCGACTATCTGTGATGGCTAGAGATTTCCTGGCGGTGCAGGCAACTTCAGTTGTCCCAGAAGATCTTTTCTGTGGAAAGGGTGATGAAATTGACAAGCAACGATTCTGTATGCCACATAATAGCACACAAGCTATTCTTTGTATCAAGTCATGGATTCAGGTTGGCATCAAGTTTAAGTTAAAATCAACTGAGATAGATTATGAGAGGTTGATGGAACTGGCAGCTGCAGCTGCTCCAACAGATAATAGTCCTGCAAGTTCAGACAAGAAGCAAAAATAA 1881 0.4226 MDWPGVNNHFRTYKVDDQKSMMDVALISNMDPVNIGLGCSDKPAPVTPLKPRKKTMTSVYLKFFETAADGKTRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGDAVSNSVVRTVAVVKKSQHQGKASQVDYDHLNWLLIRWLVLASLPPSTLEEKWLVNSYKFLNPAIQLWPSDKYRTVLDEVFRSMREDVRALLEQVPSKLSITLDFWTSFEQIYFMSVTCQWIDENWCFQKLLLDICRIPYPCGGAEIYRCLIKVLKFYNIENRILSCTHDISTSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNMIIDDGLRSAKQLISKIREFVIELNASPMISEDFIQLSTAYQEGTWKFPLDVSARWSGNYQMLDLVRKAGKSVDAVIRKYEEMLGSRMLLGSSDKSVVNIMHQYLEPFYKTTNNICTKNHVTAQIGSKMLQKKWLKRPEIILIRTHFIRNYSTSHFSSMSSGYNGQEIEDGGSVSFAEEIARKKRRTSMSSATDELTQYLSEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEDLFCGKGDEIDKQRFCMPHNSTQAILCIKSWIQVGIKFKLKSTEIDYERLMELAAAAAPTDNSPASSDKKQK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02094 626 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 440 596 - -
Cca11g02094 626 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 36 433 - -
Cca11g02094 626 Pfam BED zinc finger 62 100 IPR003656 GO:0003677
Cca11g02094 626 Pfam hAT family C-terminal dimerisation region 506 586 IPR008906 GO:0046983
Cca11g02094 626 SUPERFAMILY Ribonuclease H-like 191 588 IPR012337 -
Cca11g02094 626 SMART bed5 55 102 - -
Cca11g02094 626 PANTHER BED FINGER-RELATED 440 596 IPR045259 -
Cca11g02094 626 PANTHER BED FINGER-RELATED 36 433 IPR045259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02094 - - ahf:112708868 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02094 11 46474635 46477654 Cca11g02094 11 46474635 46477654 ECH
Cca11g02094 11 46474635 46477654 Cca03g00824 03 18974787 18978201 PCT