Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02021 ATGGAAACTGGAGGTGATAACAAAAATATAGGTGAACAAGGACACGGAATCCCAAGtcatccttcaccaccaccagcatcatcatcatcaCAAGACCCTTTCCAAGTACCTAATGATGCACCCAACAACCCAAGTAATGAATGCAAGAACAATGATACTACTCCATTTGCAAATGAACCATCACCAGGAAGTCCATTCCATGAGCCAACAAAAACTGACGGCAAGACCCCTTCATGGGAGACTAATGAAGATGATGATGTTCGAATAAGCTCTAAGCCAAACCAAGGATCATCAGAAACACAAAACCCTCCAGTGCAGGTGATGGAGCGTCCAGGTGAATCCGCAGGTACCTCTCCTCAGTACACTTTTCCATCCCATGTTTTCTCCAAGAGCAACATAAACTCCCCAGTGGAATGGAGCACTGCCTCTAACGAATCACTGTTCAGCATCTATATGGGAAACACGAGCTTCTCAAATGAATTGGTTGGTTTCAAATCCGGTGAGTTGGATAAGCCTGGTGAGGTGTACATGTATGATCAGCCCATTGCCTCGCCAACTCCAGAACAGCCACCTGCCAAGGTGAACAAGTTCAATGATATCAGCCAAAGAACTGCTGAACACCAGTTACTACACGAAGAAAGTTCCAAAGCTACTGAAGCAAAAGCTGCTGAGACAATGAGAGAGGTTATAATGGAAAGTAGTCAAACCACAGAGAATGTTGCTTCCAATTCTCATCGCCAGTCAGACGGGAGTGCCAAGTCCTATGCATTTCAATCGTCGAAAAGTCGAGATAAAAGAGCTTCATCCAATGTTGCTGGAGAGAAGGAAAATCAACAGAAGCCGTCAGAGGAAAATGAAACACCAAATACAGCTGATCAGGCCCCAAAATCAAACAAATGGCTTTGTTTTTCGTGCTGTCCGTTCTGTAATTAG 933 0.4277 METGGDNKNIGEQGHGIPSHPSPPPASSSSQDPFQVPNDAPNNPSNECKNNDTTPFANEPSPGSPFHEPTKTDGKTPSWETNEDDDVRISSKPNQGSSETQNPPVQVMERPGESAGTSPQYTFPSHVFSKSNINSPVEWSTASNESLFSIYMGNTSFSNELVGFKSGELDKPGEVYMYDQPIASPTPEQPPAKVNKFNDISQRTAEHQLLHEESSKATEAKAAETMREVIMESSQTTENVASNSHRQSDGSAKSYAFQSSKSRDKRASSNVAGEKENQQKPSEENETPNTADQAPKSNKWLCFSCCPFCN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02021 310 MobiDBLite consensus disorder prediction 229 266 - -
Cca11g02021 310 MobiDBLite consensus disorder prediction 267 282 - -
Cca11g02021 310 MobiDBLite consensus disorder prediction 205 226 - -
Cca11g02021 310 MobiDBLite consensus disorder prediction 31 60 - -
Cca11g02021 310 MobiDBLite consensus disorder prediction 91 130 - -
Cca11g02021 310 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 30 310 - -
Cca11g02021 310 MobiDBLite consensus disorder prediction 202 296 - -
Cca11g02021 310 PANTHER - 30 310 - -
Cca11g02021 310 MobiDBLite consensus disorder prediction 73 90 - -
Cca11g02021 310 MobiDBLite consensus disorder prediction 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02021 Cca-Chr11 45651520 45652829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02021 - - gmx:102660994 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02021 11 45651520 45652829 Cca03g00662 03 11965580 11974902 PCT