Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00662 ATGGAATCTATATATATGAATGGATCTAATGTTGATATGAGAACTGGTGCTTCTACAAAAACAGGTGGAGGAGAACAATTCAACATAGAAAATAAACAAGTACCCTCTTCTTCACCCTTCTCATCAGAAGATTTCTTTGACTTTATGCCAAATGAAACAACCACTAGGACCAATGCTAGACCTCTAGGTGCAACCTCTCCTACACATGACCAAAACTTCTTACAATCTGAATTTCATCAAACACATTCAGTGGCCAATAAGGGAGATGGAAGGCCAATTAATAGTCATAGCCATGTGGAATCAGATCCTGCTAACCCTTTTTTTGAACTTGATCCTTCTCCATTGGCAAATAACATAGCCCCCTCTTCATCATCTCAAAACCCCTTCCTAATGACGACTGATGCCAACAACACTTCACATTTATTGCCTGCCATGCATCAAGAAAGTGGTGGCATGGCTAACAATGGTTTCCCTCCATCATTGGGACCATCTAGTTTTGAATCTTCACAAGGGAATCCCTTCAAACCGCCAACAACTTCAACCACCAAGAAAACTTCTGTTGGTGCAGCAGACTTGGTGAAAGGTGGTGAACATTATGATCTTGGAAATGAATCACATCATAGACTTCCACCTGCTGGACAAGATCATTGGAGCATGCCTAGTGGTGAAGAAAGGACACATCCTGTTAACACATATGGTGAAACTCATGTTTCCTCTTCAAGCCAACAATTAGATCCCTTCAAATTTGAATCACCACTTAACCGAAAACAAGCTGATGCAACTTCTAAGAACCATGCAGGTGCTACTACCATCCCAACAAGTGTTGAACAACCTCATCATACCTTTTCAGTTAGAGAACAAGGACATCATGCCAAGACTAGCAGCAATTCAGGAACAGATAACAGGTTTGGCTCATCATCAGTGCCATCATTTCCACCAGCTTATGAATCTTCAACTCAAGACTACATGCATAATTCTGCAAGTGCTACCACTAAACGGGGAAAGGATTCTAGGTCGGCTTCAGAATCCGGTGATGATGATATGCCAATCAGTTCTTTTCCTAGGCACGGACAACAAGCTAGCAATGGCTCAGAAAAACAAACTCCTCCACTACAGGTGATGGAGCGGTCAGAGGATACTACAAAATCTTCCAAGTACAGGTTTCCATCACATGTGTTTTCCAGAAAACAATCAAACACCCAATGGAGCACTGCCTCTAATGAATCATTGTTCAGCATTCAAATGGGAAACACAAGTTTCTCTAGTGACTTGGCTTGGATGAGTAAATCTGGTGACATAGATAGACCAGGTGACACAAACCCTTCTAGTGTGACTCCAAGCAATCAGCCACAAATCCCACTACCACTTCCACCCCCACCCCAAGCACCATCTACAAAATTCAATCATATCAGCCAAAGCACTGCCAATCAACATGAAGGTTCAAAAGTGACTGAAGAAAAGGCTGCTGAGACAATGAGAGAGGTTATAATGGAAAATAGCATAAACAATGAGAATATACGTAAAGGGGATTCAACAACTGCTGGTGGACCAACACGTGCTGATAGGCATGCTCACGTTCATTCCAGTTCTCACCGTTCAGATGGGAGCACCAAATCCTTTGCGTTTAATGTAATGACAGATGGAGACAAAGCTCTTTCATCAAAGCATAGTGAAGACAAGAGAAAGCAGCAGAAACAGCCAGAGCAGCAAAATATTAAAGCAACACCAGATGTAGCAGCAGCTCAGAACCCCAAGCCAACCCCAAATGCTTCTAATCAGAACAAATCATGGCTATCTTGCTTTCCATGCTGTGGTTAG 1818 0.4235 MESIYMNGSNVDMRTGASTKTGGGEQFNIENKQVPSSSPFSSEDFFDFMPNETTTRTNARPLGATSPTHDQNFLQSEFHQTHSVANKGDGRPINSHSHVESDPANPFFELDPSPLANNIAPSSSSQNPFLMTTDANNTSHLLPAMHQESGGMANNGFPPSLGPSSFESSQGNPFKPPTTSTTKKTSVGAADLVKGGEHYDLGNESHHRLPPAGQDHWSMPSGEERTHPVNTYGETHVSSSSQQLDPFKFESPLNRKQADATSKNHAGATTIPTSVEQPHHTFSVREQGHHAKTSSNSGTDNRFGSSSVPSFPPAYESSTQDYMHNSASATTKRGKDSRSASESGDDDMPISSFPRHGQQASNGSEKQTPPLQVMERSEDTTKSSKYRFPSHVFSRKQSNTQWSTASNESLFSIQMGNTSFSSDLAWMSKSGDIDRPGDTNPSSVTPSNQPQIPLPLPPPPQAPSTKFNHISQSTANQHEGSKVTEEKAAETMREVIMENSINNENIRKGDSTTAGGPTRADRHAHVHSSSHRSDGSTKSFAFNVMTDGDKALSSKHSEDKRKQQKQPEQQNIKATPDVAAAQNPKPTPNASNQNKSWLSCFPCCG 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00662 605 MobiDBLite consensus disorder prediction 551 567 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 231 248 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 1 69 - -
Cca03g00662 605 PANTHER SMOOTHELIN-LIKE PROTEIN 1 46 604 - -
Cca03g00662 605 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 46 604 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 448 464 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 288 334 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 465 479 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 255 281 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 424 595 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 496 512 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 354 377 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 386 404 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 568 595 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 197 211 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 158 187 - -
Cca03g00662 605 MobiDBLite consensus disorder prediction 146 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00662 Cca-Chr3 11965580 11974902 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00662 - - ccaj:109815975 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00662 03 11965580 11974902 Cca03g00662 03 11965580 11974902 ECH
Cca11g02021 11 45651520 45652829 Cca03g00662 03 11965580 11974902 PCT