Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02017 ATGGATTTATGGGTTGTTGCAGCCGTTGCTGGAGCTGGGTGCTTAGCTAAATATTTGAACAAACTTTCGAAGAATGGTGATAACTTATCTCATTTGTCTTCAGAGGATTCCAGTTTTGAGAATCCTGAGGCCCCAACCCATCCCTTATGCACACAAGCAGGGAGAGATTCTTTAGATAGAAGGGTTTCAGATGTGAATTCACAGGGTGGTGTTTTTGCAATAGAATTGGCTTCTACCAAAGGGATTGACAGTGAAAAAGTAAGGCCATTCAGGAGTTGCAATGAGAGTGACGTCCTTTCTGTATCTAACTTTACTGATATTGGATATGGAAATGAGCAAAGCTCCACTGTTGGTGGCAATTGTGGTTTCCTTCTTCCGGATTTCGGTGATTTGTCTGCAGGAAAATTAGGTCATAATGCTTTTGGAAATCAAATCTCTCACAGGACTAAGCATTTGTATGGGCATATTAGTAAACCTTCAAACTCCTTGGAAAGTTGCCTAATGGCTCAGCTATGCAAAGTGCACGGCAAAATGAAAGAATCCGTTTCGTTGTCATCCACAGCCACGAGATCATTCATTGTTAGTGATGGAAGCCAAATGATTAGCAGAACAAATGATGGTGATTCTTTCGATGAACTAGCCGGAAGTGAAGAATGTAGGTTGCATAGAGAAGCCAGTAAAGTGAAAGATGAGAGTGTACTATTTGGAGTCCCTTCCTTACCAAACATCAGGTCTTTCAATGATGCCAAGGAGATGAAATTTAATGCAGGCAATGGACGAAGTGGGAGATTGGGCCCTTCCAGCAATGTGTTCAGTGATGCAACATTTCTCTTCAGTCTTGGGATTTCTTTCGGCATAATAACTTCCATCTTGACAAATAAAAGAGAAGTGGACAAGTTAAGAGAGTCGTTGAAGCAGACTGAAAACTTGGTTAAAGATCTACAAGAGGATCTTGAAATGAAAGATTCAACGAGGGTGAAGGAGTTACATAATGAAAATTATGTTTCAAATAGTACTTGTGATCATTCCTTATGTGATAAGGAGCTAAATGGATTTTCACCTGAAAAGCACACAGATAACTCTCCAATAATTGACCGCAAAAAATCATATGATCAGAAGGAAGAAGATAGTTCAGAATCTATGAGCAAAATTGAAGCCGAGCTTGAAGCTGAACTTGAGAGATTGGGATTAAACATGAACGAATCTAGCCCAGAAAGACCACTATCTGAGTTTTTTGAGCTTGACCCTGATTTTGTAGCAGATTTTGCTGAAGGTGAGTTGCAAGCTGACATGATGGGCGGGAAACATTTTGTCCATTCCAAACTAAATGAGGATGCCAGTGACACTATGATCCCTGAAAATCATGCTGTTTGCCCTCATGAACTAAGACTGCGCTTGCATGAAGTTATCCAATCCAGACTTAAGAGACGTGTACAGGAGCTTGAGATTGCTCTCGAAAATAGCCAGAGGAAATTACGGTTCATGGAATCAGAGCATGAGAGTCATTCCCCGAAGTGCTTCTCAGGTTGTGGGCAAGCTTTATCCCTTACTGAAGGAAGAAATATATTGACTTATAATGATTGTGAGCCTATGACCGAACCCTATTCATCTGGTGAAACTCTAGGTGCTTACAATGACACCTATTTTGAAGAAATCATAAAGATAGATGACTTTGAAGAAAATTCACCACCAAGCATCCATAATACTGACTACAAAGTAGATTCACATTCACATGATTTACATGTATTAGGGGTTCAACTTTGTGGAGCAAACGATCTCGTTACTCATTCCACTGTTAACGAAGAGAGACTATCAAGGGAACTCTCTTCTGGTGAGGTCACAATGTTGGAAGGGCTAAGCTCTACCAACTATGAATTAAATGATGTTACTGGAGATGAAAAAAGTGAGTGTGATTATGAGGTGGAAAGGCAATTAATTAGACAAATTGTTGAAAGAACCAAGAAAGGTTCTCCTGTCTTACAAAATGCCAGAAGGATATTGTATTCTATGGATGAAGATGAACATTGA 2028 0.3989 MDLWVVAAVAGAGCLAKYLNKLSKNGDNLSHLSSEDSSFENPEAPTHPLCTQAGRDSLDRRVSDVNSQGGVFAIELASTKGIDSEKVRPFRSCNESDVLSVSNFTDIGYGNEQSSTVGGNCGFLLPDFGDLSAGKLGHNAFGNQISHRTKHLYGHISKPSNSLESCLMAQLCKVHGKMKESVSLSSTATRSFIVSDGSQMISRTNDGDSFDELAGSEECRLHREASKVKDESVLFGVPSLPNIRSFNDAKEMKFNAGNGRSGRLGPSSNVFSDATFLFSLGISFGIITSILTNKREVDKLRESLKQTENLVKDLQEDLEMKDSTRVKELHNENYVSNSTCDHSLCDKELNGFSPEKHTDNSPIIDRKKSYDQKEEDSSESMSKIEAELEAELERLGLNMNESSPERPLSEFFELDPDFVADFAEGELQADMMGGKHFVHSKLNEDASDTMIPENHAVCPHELRLRLHEVIQSRLKRRVQELEIALENSQRKLRFMESEHESHSPKCFSGCGQALSLTEGRNILTYNDCEPMTEPYSSGETLGAYNDTYFEEIIKIDDFEENSPPSIHNTDYKVDSHSHDLHVLGVQLCGANDLVTHSTVNEERLSRELSSGEVTMLEGLSSTNYELNDVTGDEKSECDYEVERQLIRQIVERTKKGSPVLQNARRILYSMDEDEH 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02017 675 MobiDBLite consensus disorder prediction 30 45 - -
Cca11g02017 675 Coils Coil 471 498 - -
Cca11g02017 675 MobiDBLite consensus disorder prediction 352 381 - -
Cca11g02017 675 Coils Coil 290 324 - -
Cca11g02017 675 PANTHER EMB|CAB62613.1 1 675 - -
Cca11g02017 675 MobiDBLite consensus disorder prediction 30 50 - -
Cca11g02017 675 PANTHER EMB|CAB62613.1 1 675 IPR040348 GO:0008356
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02017 Cca-Chr11 45634130 45638835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02017 - - gmx:100776932 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00659 03 11889003 11893667 Cca11g02017 11 45634130 45638835 ECH
Cca11g02017 11 45634130 45638835 Cca11g02017 11 45634130 45638835 ECH