Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00659 ATGGATTTATGGGTTGTTGCAGCTGCTGCTGGAGCTGGGTATTTGGCTAAGTATTTGAATAGGGTTTCGAAAAATGGCGATAGCTCGGGTCACATGTTGTTGGAGGATTCTATTTTTGAGAATCCTGTGTCCCCTAGCCACCCCTATCAATTTGCCAAACAAGCAGGAAGAAATGAATTGGGCAAGGATGTTTTTGCTGATGGAAAGGCTTTAGAGGGGAAGTCTTCAGATCTGAACTCAATGGATGGTCTTTTTACAGGAGAACGGGTTTCTACTAGAGGGATTACTAGTGAAAAAATGCTACATTTTCGGAATTATGACAAGCATGATGTTCTATCTATATCAAACTTGGCAATGTCATTATCACCATATGATGGTAACTTCAAGGATGTTGATGATGGAAATGACCAAAGTTCTGGTGTTGTTGGCGATCATGGTTTCCTTCTTCCGGGTTCTTCTGTTGAACTGGCTTCTTTCCATAACTCTTCTGGACATAAAACCTTTCTCAGGATGAAGCATTTGTCTGGGAATGTTAATAGACCTTTAAGTTCCCTAGAAAGTTGTTTTATGGCTCAGCTGTACAAGGAGCATGCTGAAACAGAAGAATTTGTTTTTAGTTCTGTTTCATCGCGGTCCATGGCCACAAGGTCATTTTTTGTAAGCAATGGAAGCCAAATAATCAACAGAGCAAATATTAATCAACAGAAAGAAGCTGGTCATGTAATGGATGAAAATGTATTTGGAGTTCCTTCCTTACCAAACATAAGATCTGTAAATGATGCCAAGAAGATGAAATTCAATGCAGTCATTGGGAGGAGCCGAAGACGGAGCTCTTCTGACAACATGTCAAGTGGGAAACTCAGCCATACTCAACAATATGATAAAGCATTTCTCTTCAGTCTTGGGATTTCTTTTGGGACGATAACTTGCATAATGGCGAATAAAAGAGAAATAGACAAGTTAAGAGAGTTGTTGAAACAGACTGAAAACTTGGTTCAAGATCTACAAGAGGAACTCGAAATGAAAGATTCAATGACTGTGAAGGAGTTACAGAATGAAAATTATGGTTCACAGGATACATGTGATCATTCCTTTAATGATAAGGAGCTAAATGAATTTTCCCCTGAAAAACATATGGATAACTCTCCTAAGTTTGACTCCAAAGACTCATATCATCAAAAGCTAGAAGAAGGTTCAGAATCCATGAGCAaaattgaagctgagcttgaagctgaacttgagagattggggttggacatgaaTGCATCAAGCCTGGAAAAAAAGTTATCTGAGCTTGTTGAGCTTGAACCAGAGTTCGTAGCAGATTTCGCTCAAGGTGAATTACGAGCCGACATGGTCAGTGGGGAAGATTCTGACCATCCAAATGAGGATGCCAGTGACCCAACACCTCTCCCTGCCAACTATGCAGTTTTGCCTCATGAACTGAGTTTGCGTTTGCATGAAGTTGTACAATCCCAACTTGAGGAACGTGTGAAGGAGCTTGAGAGTGCGCTCGAAAATAGCCAGAGGAAAGTGCTGCTTTTGGAATCAAAGCAAGAGGGTTATCTCCAAAAGTCATCTTCCTTTAGTAGAGAAAATGATGATTCTGATCTTATGTCCCAGCCCTTAATCCTCAATTTATCAGGTGAAGCTCTTGATGCATACAATGAGGCCTATGAAGAATTAATAAAGATAAATGACTCTGAAGAAAATTCACCATTAGACATCCTTGGTAGTGACCACGAGGAAGGTTCACATTCACATGATTGGCATGCAATTGGGGTTCAAAGTGGTGAATCAAATGGTTCTAGTAAGGTAACATTGTTGGATGGTACTGAAGATGAAAGTTGTGATTTTGATAACGAGGTGGAACAGCAATTGATAAGGCAAATTGTTGAAAGGACCAAGAAAGGTTCTCCTCTTTTTAAAAATGCACAAAAGATATTGTATTCTATGGATGATGAACAATGA 1971 0.3861 MDLWVVAAAAGAGYLAKYLNRVSKNGDSSGHMLLEDSIFENPVSPSHPYQFAKQAGRNELGKDVFADGKALEGKSSDLNSMDGLFTGERVSTRGITSEKMLHFRNYDKHDVLSISNLAMSLSPYDGNFKDVDDGNDQSSGVVGDHGFLLPGSSVELASFHNSSGHKTFLRMKHLSGNVNRPLSSLESCFMAQLYKEHAETEEFVFSSVSSRSMATRSFFVSNGSQIINRANINQQKEAGHVMDENVFGVPSLPNIRSVNDAKKMKFNAVIGRSRRRSSSDNMSSGKLSHTQQYDKAFLFSLGISFGTITCIMANKREIDKLRELLKQTENLVQDLQEELEMKDSMTVKELQNENYGSQDTCDHSFNDKELNEFSPEKHMDNSPKFDSKDSYHQKLEEGSESMSKIEAELEAELERLGLDMNASSLEKKLSELVELEPEFVADFAQGELRADMVSGEDSDHPNEDASDPTPLPANYAVLPHELSLRLHEVVQSQLEERVKELESALENSQRKVLLLESKQEGYLQKSSSFSRENDDSDLMSQPLILNLSGEALDAYNEAYEELIKINDSEENSPLDILGSDHEEGSHSHDWHAIGVQSGESNGSSKVTLLDGTEDESCDFDNEVEQQLIRQIVERTKKGSPLFKNAQKILYSMDDEQ 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00659 656 Coils Coil 484 518 - -
Cca03g00659 656 PANTHER EMB|CAB62613.1 1 655 IPR040348 GO:0008356
Cca03g00659 656 Coils Coil 311 345 - -
Cca03g00659 656 Coils Coil 395 415 - -
Cca03g00659 656 Coils Coil 552 572 - -
Cca03g00659 656 PANTHER EMB|CAB62613.1 1 655 - -
Cca03g00659 656 MobiDBLite consensus disorder prediction 372 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00659 Cca-Chr3 11889003 11893667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00659 - - gmx:100801395 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00659 03 11889003 11893667 Cca11g02017 11 45634130 45638835 ECH
Cca03g00659 03 11889003 11893667 Cca03g00659 03 11889003 11893667 ECH