Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02011 ATGGCTGCTCTACCTCTTGCACTTCTTCTTCTAGCTTTCGCTGGCACTTCAAGTGCGAATTGGTGCGTTTGCAAGGACGGAAGCGACGCCGTTCTGCAGAAGACGTTGGACTACGCTTGTGGAGCCGGGGCCGACTGTAACCCTCTCCACCTAAACGGGCCTTGCTTCCAGCCCAACACCGTCAGGGCCCACTGCAACTACGCCGTCAATAGTTACTTCCAGAAGAAGGGTCAGGCCCAAGGCTCCTGCGACTTCGCGGGAACAGCCACTGTTACTGCATCTGACCCCAGCTCTAGCGGTTGCGCCTACCCTTCTAGCGTCAGGGATGCCGCTGCAGGCACTAGTACAACTCCTGTGACTACCACACCAACCGTGGGCACCACTCCTACTACTGGAACTCCATCAACAAgcaccggcaccggcaccggcaccggcaccggcaccagtaccggtaccaccaccggcaccaccaccggcacTGGTACTACTCCATACAGCACAACACCTGGAGTATTAGGAGGGATTGGCAGTGGCATGGGACCTTCAGGATCTGGCATGAATGATGAAAGTCATGGTGGCCTTAGACTTGTACACGGTAGTTTCATCTCAATAACCATCTTCTCTGCTTTCATCATGCTCTGCTGGGGTTGA 651 0.4823 MAALPLALLLLAFAGTSSANWCVCKDGSDAVLQKTLDYACGAGADCNPLHLNGPCFQPNTVRAHCNYAVNSYFQKKGQAQGSCDFAGTATVTASDPSSSGCAYPSSVRDAAAGTSTTPVTTTPTVGTTPTTGTPSTSTGTGTGTGTGTSTGTTTGTTTGTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESHGGLRLVHGSFISITIFSAFIMLCWG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02011 216 SMART X8_cls 20 103 IPR012946 -
Cca11g02011 216 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 208 - -
Cca11g02011 216 MobiDBLite consensus disorder prediction 109 170 - -
Cca11g02011 216 Pfam X8 domain 21 90 IPR012946 -
Cca11g02011 216 PANTHER BETA-1,3 GLUCANASE 1 208 IPR044788 -
Cca11g02011 216 Gene3D - 15 115 - -
Cca11g02011 216 MobiDBLite consensus disorder prediction 109 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02011 Cca-Chr11 45580177 45583431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02011 16 121 Miscellaneous Gene Families AT2G16230 42.991 3.00e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02011 - - gmx:100500078 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00649 03 11589767 11597041 Cca11g02011 11 45580177 45583431 ECH
Cca11g02011 11 45580177 45583431 Cca11g02011 11 45580177 45583431 ECH